Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.49■□□□□ 0.87
COL21A1Q96P44 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
COL21A1Q96P44 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL21A1Q96P44 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.49■□□□□ 0.87
COL21A1Q96P44 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
COL21A1Q96P44 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL21A1Q96P44 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.49■□□□□ 0.87
COL21A1Q96P44 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL21A1Q96P44 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.49■□□□□ 0.87
COL21A1Q96P44 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.49■□□□□ 0.87
COL21A1Q96P44 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COL21A1Q96P44 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
COL21A1Q96P44 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
COL21A1Q96P44 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.49■□□□□ 0.87
COL21A1Q96P44 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL21A1Q96P44 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL21A1Q96P44 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL21A1Q96P44 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COL21A1Q96P44 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
COL21A1Q96P44 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL21A1Q96P44 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.48■□□□□ 0.87
COL21A1Q96P44 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL21A1Q96P44 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL21A1Q96P44 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.48■□□□□ 0.87
COL21A1Q96P44 pRNA.6-201ENST00000610482 90 ntBASIC20.48■□□□□ 0.87
COL21A1Q96P44 pRNA.5-201ENST00000612139 90 ntBASIC20.48■□□□□ 0.87
COL21A1Q96P44 pRNA.11-201ENST00000618423 90 ntBASIC20.48■□□□□ 0.87
COL21A1Q96P44 pRNA.13-201ENST00000619112 90 ntBASIC20.48■□□□□ 0.87
COL21A1Q96P44 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.48■□□□□ 0.87
COL21A1Q96P44 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL21A1Q96P44 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL21A1Q96P44 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL21A1Q96P44 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
COL21A1Q96P44 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COL21A1Q96P44 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.48■□□□□ 0.87
COL21A1Q96P44 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL21A1Q96P44 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL21A1Q96P44 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL21A1Q96P44 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.47■□□□□ 0.87
COL21A1Q96P44 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
COL21A1Q96P44 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.47■□□□□ 0.87
COL21A1Q96P44 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.47■□□□□ 0.87
COL21A1Q96P44 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.47■□□□□ 0.87
COL21A1Q96P44 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL21A1Q96P44 MIR3181-201ENST00000578512 73 ntBASIC20.47■□□□□ 0.87
COL21A1Q96P44 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL21A1Q96P44 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
COL21A1Q96P44 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL21A1Q96P44 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COL21A1Q96P44 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COL21A1Q96P44 AC092053.2-201ENST00000640557 1818 ntBASIC20.46■□□□□ 0.87
COL21A1Q96P44 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL21A1Q96P44 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL21A1Q96P44 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL21A1Q96P44 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL21A1Q96P44 UNC93B3-201ENST00000308076 687 ntBASIC20.46■□□□□ 0.87
COL21A1Q96P44 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL21A1Q96P44 SERBP1P1-201ENST00000396021 1160 ntBASIC20.46■□□□□ 0.87
COL21A1Q96P44 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.46■□□□□ 0.87
COL21A1Q96P44 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL21A1Q96P44 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.46■□□□□ 0.87
COL21A1Q96P44 AL499627.2-201ENST00000606283 725 ntBASIC20.46■□□□□ 0.87
COL21A1Q96P44 AL138724.1-201ENST00000606771 1088 ntBASIC20.46■□□□□ 0.87
COL21A1Q96P44 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL21A1Q96P44 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COL21A1Q96P44 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.46■□□□□ 0.87
COL21A1Q96P44 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COL21A1Q96P44 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
COL21A1Q96P44 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL21A1Q96P44 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL21A1Q96P44 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
COL21A1Q96P44 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.45■□□□□ 0.86
COL21A1Q96P44 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL21A1Q96P44 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL21A1Q96P44 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
COL21A1Q96P44 AC096631.2-201ENST00000436136 790 ntBASIC20.45■□□□□ 0.86
COL21A1Q96P44 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL21A1Q96P44 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COL21A1Q96P44 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.45■□□□□ 0.86
COL21A1Q96P44 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COL21A1Q96P44 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.45■□□□□ 0.86
COL21A1Q96P44 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.44■□□□□ 0.86
COL21A1Q96P44 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL21A1Q96P44 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
COL21A1Q96P44 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
COL21A1Q96P44 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL21A1Q96P44 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.44■□□□□ 0.86
COL21A1Q96P44 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL21A1Q96P44 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL21A1Q96P44 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COL21A1Q96P44 LINC01960-201ENST00000563759 1884 ntBASIC20.43■□□□□ 0.86
COL21A1Q96P44 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL21A1Q96P44 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL21A1Q96P44 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
COL21A1Q96P44 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL21A1Q96P44 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL21A1Q96P44 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COL21A1Q96P44 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COL21A1Q96P44 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.43■□□□□ 0.86
COL21A1Q96P44 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms