Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NPIPB3Q92617 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
NPIPB3Q92617 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
NPIPB3Q92617 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.12■□□□□ 0.33
NPIPB3Q92617 AC010997.5-201ENST00000609182 354 ntBASIC17.12■□□□□ 0.33
NPIPB3Q92617 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.12■□□□□ 0.33
NPIPB3Q92617 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB3Q92617 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NPIPB3Q92617 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB3Q92617 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB3Q92617 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.12■□□□□ 0.33
NPIPB3Q92617 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB3Q92617 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB3Q92617 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB3Q92617 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NPIPB3Q92617 C17orf82-201ENST00000623772 1530 ntBASIC17.11■□□□□ 0.33
NPIPB3Q92617 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB3Q92617 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB3Q92617 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB3Q92617 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB3Q92617 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.11■□□□□ 0.33
NPIPB3Q92617 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB3Q92617 TSPY9P-201ENST00000440215 945 ntBASIC17.11■□□□□ 0.33
NPIPB3Q92617 TSPY11P-201ENST00000442607 1045 ntBASIC17.11■□□□□ 0.33
NPIPB3Q92617 AC239859.2-201ENST00000444165 318 ntBASIC17.11■□□□□ 0.33
NPIPB3Q92617 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB3Q92617 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB3Q92617 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB3Q92617 AC010542.4-201ENST00000563151 1910 ntBASIC17.11■□□□□ 0.33
NPIPB3Q92617 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.11■□□□□ 0.33
NPIPB3Q92617 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NPIPB3Q92617 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.1■□□□□ 0.33
NPIPB3Q92617 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB3Q92617 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB3Q92617 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NPIPB3Q92617 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
NPIPB3Q92617 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB3Q92617 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC17.1■□□□□ 0.33
NPIPB3Q92617 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB3Q92617 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPIPB3Q92617 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.1■□□□□ 0.33
NPIPB3Q92617 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.1■□□□□ 0.33
NPIPB3Q92617 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.1■□□□□ 0.33
NPIPB3Q92617 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.09■□□□□ 0.33
NPIPB3Q92617 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB3Q92617 FAM99A-202ENST00000538190 1989 ntBASIC17.09■□□□□ 0.33
NPIPB3Q92617 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB3Q92617 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB3Q92617 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB3Q92617 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB3Q92617 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB3Q92617 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB3Q92617 CA15P2-201ENST00000611168 834 ntBASIC17.09■□□□□ 0.33
NPIPB3Q92617 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB3Q92617 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB3Q92617 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.09■□□□□ 0.33
NPIPB3Q92617 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.09■□□□□ 0.33
NPIPB3Q92617 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NPIPB3Q92617 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.09■□□□□ 0.33
NPIPB3Q92617 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB3Q92617 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.09■□□□□ 0.33
NPIPB3Q92617 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB3Q92617 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB3Q92617 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPIPB3Q92617 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPIPB3Q92617 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.08■□□□□ 0.33
NPIPB3Q92617 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.08■□□□□ 0.33
NPIPB3Q92617 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB3Q92617 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NPIPB3Q92617 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB3Q92617 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB3Q92617 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB3Q92617 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB3Q92617 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.08■□□□□ 0.32
NPIPB3Q92617 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
NPIPB3Q92617 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB3Q92617 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NPIPB3Q92617 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB3Q92617 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB3Q92617 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPIPB3Q92617 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPB3Q92617 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPB3Q92617 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.07■□□□□ 0.32
NPIPB3Q92617 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NPIPB3Q92617 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.07■□□□□ 0.32
NPIPB3Q92617 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NPIPB3Q92617 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPB3Q92617 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NPIPB3Q92617 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.07■□□□□ 0.32
NPIPB3Q92617 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPB3Q92617 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPB3Q92617 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NPIPB3Q92617 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPB3Q92617 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPIPB3Q92617 AC026310.3-201ENST00000625186 2373 ntBASIC17.07■□□□□ 0.32
NPIPB3Q92617 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.06■□□□□ 0.32
NPIPB3Q92617 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPB3Q92617 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPB3Q92617 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NPIPB3Q92617 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms