Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 KRT18P5-201ENST00000436075 1291 ntBASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CNEP1R1Q8N9A8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNEP1R1Q8N9A8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNEP1R1Q8N9A8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNEP1R1Q8N9A8 LINC01960-201ENST00000563759 1884 ntBASIC19.31■□□□□ 0.68
CNEP1R1Q8N9A8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.31■□□□□ 0.68
CNEP1R1Q8N9A8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNEP1R1Q8N9A8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNEP1R1Q8N9A8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNEP1R1Q8N9A8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CNEP1R1Q8N9A8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.31■□□□□ 0.68
CNEP1R1Q8N9A8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNEP1R1Q8N9A8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CNEP1R1Q8N9A8 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 TERF1P2-201ENST00000583350 1212 ntBASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 SMUG1P1-201ENST00000590640 811 ntBASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 BX005040.4-201ENST00000637145 1518 ntBASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CNEP1R1Q8N9A8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CNEP1R1Q8N9A8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.29■□□□□ 0.68
CNEP1R1Q8N9A8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNEP1R1Q8N9A8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNEP1R1Q8N9A8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNEP1R1Q8N9A8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
CNEP1R1Q8N9A8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CNEP1R1Q8N9A8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.29■□□□□ 0.68
CNEP1R1Q8N9A8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.29■□□□□ 0.68
CNEP1R1Q8N9A8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.29■□□□□ 0.68
CNEP1R1Q8N9A8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNEP1R1Q8N9A8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNEP1R1Q8N9A8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CNEP1R1Q8N9A8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CNEP1R1Q8N9A8 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 NTF6G-201ENST00000591094 616 ntBASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CNEP1R1Q8N9A8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNEP1R1Q8N9A8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNEP1R1Q8N9A8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.27■□□□□ 0.68
CNEP1R1Q8N9A8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.27■□□□□ 0.68
CNEP1R1Q8N9A8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNEP1R1Q8N9A8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.27■□□□□ 0.68
CNEP1R1Q8N9A8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNEP1R1Q8N9A8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNEP1R1Q8N9A8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CNEP1R1Q8N9A8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNEP1R1Q8N9A8 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CNEP1R1Q8N9A8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CNEP1R1Q8N9A8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CNEP1R1Q8N9A8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CNEP1R1Q8N9A8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CNEP1R1Q8N9A8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNEP1R1Q8N9A8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
CNEP1R1Q8N9A8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNEP1R1Q8N9A8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNEP1R1Q8N9A8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CNEP1R1Q8N9A8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.26■□□□□ 0.67
CNEP1R1Q8N9A8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNEP1R1Q8N9A8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CNEP1R1Q8N9A8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.26■□□□□ 0.67
CNEP1R1Q8N9A8 AC022517.1-201ENST00000592429 346 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms