Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
ARHGEF39Q8N4T4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF39Q8N4T4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF39Q8N4T4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF39Q8N4T4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF39Q8N4T4 YBX1P1-201ENST00000445822 960 ntBASIC20.61■□□□□ 0.89
ARHGEF39Q8N4T4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF39Q8N4T4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.61■□□□□ 0.89
ARHGEF39Q8N4T4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF39Q8N4T4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF39Q8N4T4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.61■□□□□ 0.89
ARHGEF39Q8N4T4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ARHGEF39Q8N4T4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ARHGEF39Q8N4T4 LINC00526-201ENST00000581067 1875 ntBASIC20.6■□□□□ 0.89
ARHGEF39Q8N4T4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.6■□□□□ 0.89
ARHGEF39Q8N4T4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.6■□□□□ 0.89
ARHGEF39Q8N4T4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF39Q8N4T4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.6■□□□□ 0.89
ARHGEF39Q8N4T4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF39Q8N4T4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.6■□□□□ 0.89
ARHGEF39Q8N4T4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.6■□□□□ 0.89
ARHGEF39Q8N4T4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.6■□□□□ 0.89
ARHGEF39Q8N4T4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF39Q8N4T4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ARHGEF39Q8N4T4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 ESRRAP2-201ENST00000418437 1549 ntBASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 AC123595.1-201ENST00000440769 1046 ntBASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 TPRG1LP1-201ENST00000598702 760 ntBASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ARHGEF39Q8N4T4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ARHGEF39Q8N4T4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF39Q8N4T4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ARHGEF39Q8N4T4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF39Q8N4T4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF39Q8N4T4 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF39Q8N4T4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ARHGEF39Q8N4T4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.58■□□□□ 0.89
ARHGEF39Q8N4T4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.58■□□□□ 0.89
ARHGEF39Q8N4T4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.58■□□□□ 0.89
ARHGEF39Q8N4T4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.58■□□□□ 0.89
ARHGEF39Q8N4T4 AC087623.3-201ENST00000607047 1098 ntBASIC20.58■□□□□ 0.89
ARHGEF39Q8N4T4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF39Q8N4T4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ARHGEF39Q8N4T4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
ARHGEF39Q8N4T4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.58■□□□□ 0.88
ARHGEF39Q8N4T4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF39Q8N4T4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ARHGEF39Q8N4T4 AC127496.7-201ENST00000625110 1798 ntBASIC20.57■□□□□ 0.88
ARHGEF39Q8N4T4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.57■□□□□ 0.88
ARHGEF39Q8N4T4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF39Q8N4T4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF39Q8N4T4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.57■□□□□ 0.88
ARHGEF39Q8N4T4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF39Q8N4T4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF39Q8N4T4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF39Q8N4T4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ARHGEF39Q8N4T4 AC068473.5-201ENST00000616428 2072 ntBASIC20.57■□□□□ 0.88
ARHGEF39Q8N4T4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.56■□□□□ 0.88
ARHGEF39Q8N4T4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF39Q8N4T4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.55■□□□□ 0.88
ARHGEF39Q8N4T4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF39Q8N4T4 BX005040.4-201ENST00000637145 1518 ntBASIC20.55■□□□□ 0.88
ARHGEF39Q8N4T4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF39Q8N4T4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ARHGEF39Q8N4T4 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.55■□□□□ 0.88
ARHGEF39Q8N4T4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF39Q8N4T4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF39Q8N4T4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
ARHGEF39Q8N4T4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF39Q8N4T4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ARHGEF39Q8N4T4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ARHGEF39Q8N4T4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms