Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC30.52■■■□□ 2.48
ARHGEF28Q8N1W1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC30.51■■■□□ 2.48
ARHGEF28Q8N1W1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
ARHGEF28Q8N1W1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
ARHGEF28Q8N1W1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
ARHGEF28Q8N1W1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
ARHGEF28Q8N1W1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC30.5■■■□□ 2.47
ARHGEF28Q8N1W1 MFSD11-216ENST00000590393 1141 ntBASIC30.5■■■□□ 2.47
ARHGEF28Q8N1W1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC30.5■■■□□ 2.47
ARHGEF28Q8N1W1 PXK-203ENST00000383715 1756 ntTSL 5 BASIC30.5■■■□□ 2.47
ARHGEF28Q8N1W1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC30.5■■■□□ 2.47
ARHGEF28Q8N1W1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC30.5■■■□□ 2.47
ARHGEF28Q8N1W1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC30.5■■■□□ 2.47
ARHGEF28Q8N1W1 BID-214ENST00000617586 542 ntTSL 5 BASIC30.5■■■□□ 2.47
ARHGEF28Q8N1W1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC30.5■■■□□ 2.47
ARHGEF28Q8N1W1 AC104187.1-201ENST00000607510 612 ntBASIC30.49■■■□□ 2.47
ARHGEF28Q8N1W1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
ARHGEF28Q8N1W1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
ARHGEF28Q8N1W1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
ARHGEF28Q8N1W1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
ARHGEF28Q8N1W1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC30.49■■■□□ 2.47
ARHGEF28Q8N1W1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC30.48■■■□□ 2.47
ARHGEF28Q8N1W1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
ARHGEF28Q8N1W1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
ARHGEF28Q8N1W1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC30.48■■■□□ 2.47
ARHGEF28Q8N1W1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
ARHGEF28Q8N1W1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
ARHGEF28Q8N1W1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ARHGEF28Q8N1W1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
ARHGEF28Q8N1W1 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ARHGEF28Q8N1W1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC30.47■■■□□ 2.47
ARHGEF28Q8N1W1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
ARHGEF28Q8N1W1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ARHGEF28Q8N1W1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
ARHGEF28Q8N1W1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
ARHGEF28Q8N1W1 UBE2DNL-204ENST00000602536 740 ntBASIC30.47■■■□□ 2.47
ARHGEF28Q8N1W1 DUSP8P5-201ENST00000422884 1815 ntBASIC30.47■■■□□ 2.47
ARHGEF28Q8N1W1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
ARHGEF28Q8N1W1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
ARHGEF28Q8N1W1 CROCCP5-201ENST00000436658 830 ntBASIC30.46■■■□□ 2.47
ARHGEF28Q8N1W1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC30.46■■■□□ 2.47
ARHGEF28Q8N1W1 AC026185.1-201ENST00000445748 174 ntBASIC30.46■■■□□ 2.47
ARHGEF28Q8N1W1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC30.46■■■□□ 2.47
ARHGEF28Q8N1W1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC30.46■■■□□ 2.47
ARHGEF28Q8N1W1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
ARHGEF28Q8N1W1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
ARHGEF28Q8N1W1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ARHGEF28Q8N1W1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC30.46■■■□□ 2.47
ARHGEF28Q8N1W1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
ARHGEF28Q8N1W1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC30.45■■■□□ 2.47
ARHGEF28Q8N1W1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
ARHGEF28Q8N1W1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
ARHGEF28Q8N1W1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
ARHGEF28Q8N1W1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC30.44■■■□□ 2.46
ARHGEF28Q8N1W1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
ARHGEF28Q8N1W1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ARHGEF28Q8N1W1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ARHGEF28Q8N1W1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC30.44■■■□□ 2.46
ARHGEF28Q8N1W1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ARHGEF28Q8N1W1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC30.43■■■□□ 2.46
ARHGEF28Q8N1W1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC30.43■■■□□ 2.46
ARHGEF28Q8N1W1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
ARHGEF28Q8N1W1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
ARHGEF28Q8N1W1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ARHGEF28Q8N1W1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC30.43■■■□□ 2.46
ARHGEF28Q8N1W1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC30.43■■■□□ 2.46
ARHGEF28Q8N1W1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC30.43■■■□□ 2.46
ARHGEF28Q8N1W1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC30.43■■■□□ 2.46
ARHGEF28Q8N1W1 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ARHGEF28Q8N1W1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
ARHGEF28Q8N1W1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
ARHGEF28Q8N1W1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ARHGEF28Q8N1W1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
ARHGEF28Q8N1W1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
ARHGEF28Q8N1W1 AC104771.1-201ENST00000603335 964 ntBASIC30.42■■■□□ 2.46
ARHGEF28Q8N1W1 AC009237.3-201ENST00000393279 1427 ntBASIC30.42■■■□□ 2.46
ARHGEF28Q8N1W1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ARHGEF28Q8N1W1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ARHGEF28Q8N1W1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC30.42■■■□□ 2.46
ARHGEF28Q8N1W1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC30.42■■■□□ 2.46
ARHGEF28Q8N1W1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC30.42■■■□□ 2.46
ARHGEF28Q8N1W1 AL050303.2-201ENST00000619798 666 ntBASIC30.42■■■□□ 2.46
ARHGEF28Q8N1W1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
ARHGEF28Q8N1W1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ARHGEF28Q8N1W1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC30.41■■■□□ 2.46
ARHGEF28Q8N1W1 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ARHGEF28Q8N1W1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC30.41■■■□□ 2.46
ARHGEF28Q8N1W1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
ARHGEF28Q8N1W1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
ARHGEF28Q8N1W1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
ARHGEF28Q8N1W1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
ARHGEF28Q8N1W1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC30.4■■■□□ 2.46
ARHGEF28Q8N1W1 TESC-206ENST00000541210 936 ntTSL 3 BASIC30.4■■■□□ 2.46
ARHGEF28Q8N1W1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
ARHGEF28Q8N1W1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
ARHGEF28Q8N1W1 UQCRFS1P1-201ENST00000435169 820 ntBASIC30.39■■■□□ 2.46
ARHGEF28Q8N1W1 AC055733.4-201ENST00000638462 1354 ntBASIC30.39■■■□□ 2.46
ARHGEF28Q8N1W1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC30.39■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms