Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
RGPD4Q7Z3J3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
RGPD4Q7Z3J3 UNC93B4-201ENST00000505679 747 ntBASIC28.16■■■□□ 2.1
RGPD4Q7Z3J3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC28.16■■■□□ 2.1
RGPD4Q7Z3J3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
RGPD4Q7Z3J3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
RGPD4Q7Z3J3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.16■■■□□ 2.1
RGPD4Q7Z3J3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
RGPD4Q7Z3J3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC28.16■■■□□ 2.1
RGPD4Q7Z3J3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC28.16■■■□□ 2.1
RGPD4Q7Z3J3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC28.16■■■□□ 2.1
RGPD4Q7Z3J3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
RGPD4Q7Z3J3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
RGPD4Q7Z3J3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
RGPD4Q7Z3J3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC28.15■■■□□ 2.1
RGPD4Q7Z3J3 AC009237.3-201ENST00000393279 1427 ntBASIC28.15■■■□□ 2.1
RGPD4Q7Z3J3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
RGPD4Q7Z3J3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC28.15■■■□□ 2.1
RGPD4Q7Z3J3 AC004687.1-201ENST00000579003 1625 ntBASIC28.15■■■□□ 2.1
RGPD4Q7Z3J3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC28.14■■■□□ 2.1
RGPD4Q7Z3J3 AC068338.2-201ENST00000563278 1430 ntBASIC28.14■■■□□ 2.1
RGPD4Q7Z3J3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC28.14■■■□□ 2.1
RGPD4Q7Z3J3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
RGPD4Q7Z3J3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC28.14■■■□□ 2.1
RGPD4Q7Z3J3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC28.14■■■□□ 2.1
RGPD4Q7Z3J3 AP001160.3-201ENST00000601484 763 ntBASIC28.14■■■□□ 2.1
RGPD4Q7Z3J3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC28.14■■■□□ 2.1
RGPD4Q7Z3J3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RGPD4Q7Z3J3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
RGPD4Q7Z3J3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
RGPD4Q7Z3J3 DUSP8P4-201ENST00000399538 1761 ntBASIC28.14■■■□□ 2.1
RGPD4Q7Z3J3 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC28.14■■■□□ 2.1
RGPD4Q7Z3J3 RPS2P4-201ENST00000476944 856 ntBASIC28.14■■■□□ 2.09
RGPD4Q7Z3J3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC28.14■■■□□ 2.09
RGPD4Q7Z3J3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC28.14■■■□□ 2.09
RGPD4Q7Z3J3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC28.14■■■□□ 2.09
RGPD4Q7Z3J3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RGPD4Q7Z3J3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC28.13■■■□□ 2.09
RGPD4Q7Z3J3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RGPD4Q7Z3J3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
RGPD4Q7Z3J3 AL158047.1-201ENST00000445918 881 ntBASIC28.13■■■□□ 2.09
RGPD4Q7Z3J3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC28.13■■■□□ 2.09
RGPD4Q7Z3J3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC28.13■■■□□ 2.09
RGPD4Q7Z3J3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
RGPD4Q7Z3J3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RGPD4Q7Z3J3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RGPD4Q7Z3J3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
RGPD4Q7Z3J3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC28.12■■■□□ 2.09
RGPD4Q7Z3J3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC28.12■■■□□ 2.09
RGPD4Q7Z3J3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC28.12■■■□□ 2.09
RGPD4Q7Z3J3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
RGPD4Q7Z3J3 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 AC138907.5-202ENST00000569484 235 ntBASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 OR10C1-204ENST00000622521 1039 ntBASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.11■■■□□ 2.09
RGPD4Q7Z3J3 AC006058.3-201ENST00000606217 1069 ntBASIC28.1■■■□□ 2.09
RGPD4Q7Z3J3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC28.1■■■□□ 2.09
RGPD4Q7Z3J3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
RGPD4Q7Z3J3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
RGPD4Q7Z3J3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
RGPD4Q7Z3J3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC28.09■■■□□ 2.09
RGPD4Q7Z3J3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC28.09■■■□□ 2.09
RGPD4Q7Z3J3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC28.09■■■□□ 2.09
RGPD4Q7Z3J3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
RGPD4Q7Z3J3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC28.08■■■□□ 2.09
RGPD4Q7Z3J3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
RGPD4Q7Z3J3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
RGPD4Q7Z3J3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC28.08■■■□□ 2.09
RGPD4Q7Z3J3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC28.08■■■□□ 2.09
RGPD4Q7Z3J3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
RGPD4Q7Z3J3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
RGPD4Q7Z3J3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC28.07■■■□□ 2.08
RGPD4Q7Z3J3 ESRRAP1-201ENST00000400596 1257 ntBASIC28.07■■■□□ 2.08
RGPD4Q7Z3J3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC28.07■■■□□ 2.08
RGPD4Q7Z3J3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
RGPD4Q7Z3J3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC28.07■■■□□ 2.08
RGPD4Q7Z3J3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC28.07■■■□□ 2.08
RGPD4Q7Z3J3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
RGPD4Q7Z3J3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
RGPD4Q7Z3J3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC28.06■■■□□ 2.08
RGPD4Q7Z3J3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RGPD4Q7Z3J3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
RGPD4Q7Z3J3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.06■■■□□ 2.08
RGPD4Q7Z3J3 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC28.06■■■□□ 2.08
RGPD4Q7Z3J3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC28.05■■■□□ 2.08
RGPD4Q7Z3J3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
RGPD4Q7Z3J3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
RGPD4Q7Z3J3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms