Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.08■■□□□ 1.13
FNDC3BQ53EP0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.08■■□□□ 1.13
FNDC3BQ53EP0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.08■■□□□ 1.13
FNDC3BQ53EP0 LINC01960-201ENST00000563759 1884 ntBASIC22.08■■□□□ 1.13
FNDC3BQ53EP0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.08■■□□□ 1.13
FNDC3BQ53EP0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
FNDC3BQ53EP0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.08■■□□□ 1.13
FNDC3BQ53EP0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.08■■□□□ 1.12
FNDC3BQ53EP0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
FNDC3BQ53EP0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
FNDC3BQ53EP0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
FNDC3BQ53EP0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.07■■□□□ 1.12
FNDC3BQ53EP0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
FNDC3BQ53EP0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FNDC3BQ53EP0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.07■■□□□ 1.12
FNDC3BQ53EP0 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.07■■□□□ 1.12
FNDC3BQ53EP0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.07■■□□□ 1.12
FNDC3BQ53EP0 RARRES2P11-201ENST00000635158 484 ntBASIC22.07■■□□□ 1.12
FNDC3BQ53EP0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FNDC3BQ53EP0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FNDC3BQ53EP0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.07■■□□□ 1.12
FNDC3BQ53EP0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FNDC3BQ53EP0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
FNDC3BQ53EP0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FNDC3BQ53EP0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
FNDC3BQ53EP0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.06■■□□□ 1.12
FNDC3BQ53EP0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
FNDC3BQ53EP0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
FNDC3BQ53EP0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.06■■□□□ 1.12
FNDC3BQ53EP0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
FNDC3BQ53EP0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FNDC3BQ53EP0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
FNDC3BQ53EP0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FNDC3BQ53EP0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
FNDC3BQ53EP0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
FNDC3BQ53EP0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.05■■□□□ 1.12
FNDC3BQ53EP0 AC090192.1-201ENST00000517740 490 ntBASIC22.05■■□□□ 1.12
FNDC3BQ53EP0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.05■■□□□ 1.12
FNDC3BQ53EP0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.05■■□□□ 1.12
FNDC3BQ53EP0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
FNDC3BQ53EP0 AC093323.1-202ENST00000635031 2045 ntBASIC22.05■■□□□ 1.12
FNDC3BQ53EP0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FNDC3BQ53EP0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
FNDC3BQ53EP0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
FNDC3BQ53EP0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FNDC3BQ53EP0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FNDC3BQ53EP0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FNDC3BQ53EP0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
FNDC3BQ53EP0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FNDC3BQ53EP0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
FNDC3BQ53EP0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.04■■□□□ 1.12
FNDC3BQ53EP0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FNDC3BQ53EP0 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.04■■□□□ 1.12
FNDC3BQ53EP0 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.04■■□□□ 1.12
FNDC3BQ53EP0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.04■■□□□ 1.12
FNDC3BQ53EP0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
FNDC3BQ53EP0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.04■■□□□ 1.12
FNDC3BQ53EP0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
FNDC3BQ53EP0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.04■■□□□ 1.12
FNDC3BQ53EP0 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.04■■□□□ 1.12
FNDC3BQ53EP0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FNDC3BQ53EP0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.04■■□□□ 1.12
FNDC3BQ53EP0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
FNDC3BQ53EP0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
FNDC3BQ53EP0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
FNDC3BQ53EP0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.03■■□□□ 1.12
FNDC3BQ53EP0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.03■■□□□ 1.12
FNDC3BQ53EP0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.03■■□□□ 1.12
FNDC3BQ53EP0 KRT18P61-201ENST00000585825 1298 ntBASIC22.03■■□□□ 1.12
FNDC3BQ53EP0 AC004854.2-201ENST00000608450 1441 ntBASIC22.03■■□□□ 1.12
FNDC3BQ53EP0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
FNDC3BQ53EP0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FNDC3BQ53EP0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FNDC3BQ53EP0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
FNDC3BQ53EP0 AC079140.4-201ENST00000507448 529 ntBASIC22.02■■□□□ 1.12
FNDC3BQ53EP0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.02■■□□□ 1.12
FNDC3BQ53EP0 AC137761.2-201ENST00000561729 223 ntBASIC22.02■■□□□ 1.12
FNDC3BQ53EP0 AC145350.3-201ENST00000569033 163 ntBASIC22.02■■□□□ 1.12
FNDC3BQ53EP0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
FNDC3BQ53EP0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
FNDC3BQ53EP0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.02■■□□□ 1.11
FNDC3BQ53EP0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FNDC3BQ53EP0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
FNDC3BQ53EP0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.01■■□□□ 1.11
FNDC3BQ53EP0 AC016769.1-201ENST00000409132 1010 ntBASIC22.01■■□□□ 1.11
FNDC3BQ53EP0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22.01■■□□□ 1.11
FNDC3BQ53EP0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FNDC3BQ53EP0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
FNDC3BQ53EP0 AP004607.4-201ENST00000530158 1459 ntBASIC22.01■■□□□ 1.11
FNDC3BQ53EP0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.01■■□□□ 1.11
FNDC3BQ53EP0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
FNDC3BQ53EP0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
FNDC3BQ53EP0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22■■□□□ 1.11
FNDC3BQ53EP0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22■■□□□ 1.11
FNDC3BQ53EP0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22■■□□□ 1.11
FNDC3BQ53EP0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22■■□□□ 1.11
FNDC3BQ53EP0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
FNDC3BQ53EP0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
FNDC3BQ53EP0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
FNDC3BQ53EP0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms