Protein–RNA interactions for Protein: Q38SD2

LRRK1, Leucine-rich repeat serine/threonine-protein kinase 1, humanhuman

Predictions only

Length 2,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1Q38SD2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRRK1Q38SD2 LINC00526-201ENST00000581067 1875 ntBASIC21.64■■□□□ 1.05
LRRK1Q38SD2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.64■■□□□ 1.05
LRRK1Q38SD2 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.64■■□□□ 1.05
LRRK1Q38SD2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRK1Q38SD2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
LRRK1Q38SD2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
LRRK1Q38SD2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
LRRK1Q38SD2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.63■■□□□ 1.05
LRRK1Q38SD2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.63■■□□□ 1.05
LRRK1Q38SD2 KRT18P61-201ENST00000585825 1298 ntBASIC21.63■■□□□ 1.05
LRRK1Q38SD2 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRK1Q38SD2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
LRRK1Q38SD2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
LRRK1Q38SD2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.63■■□□□ 1.05
LRRK1Q38SD2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRRK1Q38SD2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
LRRK1Q38SD2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.63■■□□□ 1.05
LRRK1Q38SD2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
LRRK1Q38SD2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
LRRK1Q38SD2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRK1Q38SD2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.62■■□□□ 1.05
LRRK1Q38SD2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRK1Q38SD2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LRRK1Q38SD2 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.62■■□□□ 1.05
LRRK1Q38SD2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRK1Q38SD2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
LRRK1Q38SD2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.62■■□□□ 1.05
LRRK1Q38SD2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRK1Q38SD2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
LRRK1Q38SD2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
LRRK1Q38SD2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
LRRK1Q38SD2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.62■■□□□ 1.05
LRRK1Q38SD2 AC005224.4-201ENST00000583262 1652 ntBASIC21.62■■□□□ 1.05
LRRK1Q38SD2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
LRRK1Q38SD2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
LRRK1Q38SD2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
LRRK1Q38SD2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.61■■□□□ 1.05
LRRK1Q38SD2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRK1Q38SD2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRK1Q38SD2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LRRK1Q38SD2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.6■■□□□ 1.05
LRRK1Q38SD2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRK1Q38SD2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.6■■□□□ 1.05
LRRK1Q38SD2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRK1Q38SD2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRK1Q38SD2 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRK1Q38SD2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRK1Q38SD2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRK1Q38SD2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRK1Q38SD2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
LRRK1Q38SD2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRK1Q38SD2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRRK1Q38SD2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.59■■□□□ 1.05
LRRK1Q38SD2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.59■■□□□ 1.05
LRRK1Q38SD2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
LRRK1Q38SD2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
LRRK1Q38SD2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
LRRK1Q38SD2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRK1Q38SD2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LRRK1Q38SD2 AC079089.2-201ENST00000531211 1277 ntBASIC21.58■■□□□ 1.05
LRRK1Q38SD2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.58■■□□□ 1.05
LRRK1Q38SD2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRK1Q38SD2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
LRRK1Q38SD2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.58■■□□□ 1.04
LRRK1Q38SD2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
LRRK1Q38SD2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.58■■□□□ 1.04
LRRK1Q38SD2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.58■■□□□ 1.04
LRRK1Q38SD2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
LRRK1Q38SD2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.58■■□□□ 1.04
LRRK1Q38SD2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
LRRK1Q38SD2 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.58■■□□□ 1.04
LRRK1Q38SD2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRK1Q38SD2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.57■■□□□ 1.04
LRRK1Q38SD2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRRK1Q38SD2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
LRRK1Q38SD2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRK1Q38SD2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
LRRK1Q38SD2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.56■■□□□ 1.04
LRRK1Q38SD2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.56■■□□□ 1.04
LRRK1Q38SD2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRK1Q38SD2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRK1Q38SD2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRK1Q38SD2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRK1Q38SD2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
LRRK1Q38SD2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.56■■□□□ 1.04
LRRK1Q38SD2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.56■■□□□ 1.04
LRRK1Q38SD2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
LRRK1Q38SD2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRK1Q38SD2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRK1Q38SD2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.56■■□□□ 1.04
LRRK1Q38SD2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.56■■□□□ 1.04
LRRK1Q38SD2 AC139530.1-201ENST00000575312 1977 ntBASIC21.56■■□□□ 1.04
LRRK1Q38SD2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRK1Q38SD2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRK1Q38SD2 AP004607.7-201ENST00000527152 1677 ntBASIC21.55■■□□□ 1.04
LRRK1Q38SD2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRRK1Q38SD2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRK1Q38SD2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRRK1Q38SD2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms