Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 SGSM2-207ENST00000573062 1335 ntTSL 227.46■■□□□ 1.997e-7■■■□□ 19.2
SRSF1Q07955 IGF2BP3-213ENST00000491719 800 ntTSL 520.83■□□□□ 0.932e-7■■■□□ 19.2
SRSF1Q07955 IGF2BP3-207ENST00000468263 706 ntTSL 215.28■□□□□ 0.042e-7■■■□□ 19.2
SRSF1Q07955 IGF2BP3-210ENST00000476938 500 ntTSL 215.26■□□□□ 0.032e-7■■■□□ 19.2
SRSF1Q07955 IGF2BP3-203ENST00000465058 534 ntTSL 414.06□□□□□ -0.162e-7■■■□□ 19.2
SRSF1Q07955 IGF2BP3-211ENST00000479504 559 ntTSL 414.06□□□□□ -0.162e-7■■■□□ 19.2
SRSF1Q07955 IGF2BP3-204ENST00000466809 588 ntTSL 512.32□□□□□ -0.442e-7■■■□□ 19.2
SRSF1Q07955 IGF2BP3-206ENST00000468005 2948 ntTSL 510.73□□□□□ -0.692e-7■■■□□ 19.2
SRSF1Q07955 IGF2BP3-208ENST00000469723 556 ntTSL 58.32□□□□□ -1.082e-7■■■□□ 19.2
SRSF1Q07955 IGF2BP3-202ENST00000421467 2988 ntTSL 58.29□□□□□ -1.082e-7■■■□□ 19.2
SRSF1Q07955 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.562e-7■■■□□ 19.2
SRSF1Q07955 NFATC2IP-207ENST00000568998 720 ntTSL 311.93□□□□□ -0.55e-8■■■□□ 19.2
SRSF1Q07955 ZNF692-208ENST00000470787 1544 ntTSL 219.24■□□□□ 0.672e-8■■■□□ 19.2
SRSF1Q07955 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.62e-8■■■□□ 19.2
SRSF1Q07955 ZNF692-203ENST00000412341 1916 ntTSL 517.48■□□□□ 0.392e-8■■■□□ 19.2
SRSF1Q07955 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.242e-8■■■□□ 19.2
SRSF1Q07955 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.022e-8■■■□□ 19.2
SRSF1Q07955 ZNF692-206ENST00000463519 2704 ntTSL 1 (best)11.81□□□□□ -0.522e-8■■■□□ 19.2
SRSF1Q07955 EP400-208ENST00000611841 3129 ntTSL 58.81□□□□□ -11e-7■■■□□ 19.2
SRSF1Q07955 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.28e-8■■■□□ 19.2
SRSF1Q07955 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.28e-8■■■□□ 19.2
SRSF1Q07955 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.42■□□□□ 0.063e-10■■■□□ 19.2
SRSF1Q07955 AC012066.1-201ENST00000439252 694 ntBASIC12.1□□□□□ -0.475e-7■■■□□ 19.2
SRSF1Q07955 TCIRG1-215ENST00000533947 956 ntTSL 520.06■□□□□ 0.85e-7■■■□□ 19.1
SRSF1Q07955 TCIRG1-209ENST00000529657 842 ntTSL 519.38■□□□□ 0.695e-7■■■□□ 19.1
SRSF1Q07955 GS1-600G8.3-201ENST00000431486 2249 ntTSL 1 (best) BASIC8.03□□□□□ -1.124e-7■■■□□ 19.1
SRSF1Q07955 WDR6-213ENST00000473238 568 ntTSL 317.8■□□□□ 0.443e-6■■■□□ 19.1
SRSF1Q07955 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.95■□□□□ 0.33e-6■■■□□ 19.1
SRSF1Q07955 WDR6-205ENST00000429900 563 ntTSL 516.43■□□□□ 0.223e-6■■■□□ 19.1
SRSF1Q07955 WDR6-210ENST00000462064 589 ntTSL 513.37□□□□□ -0.273e-6■■■□□ 19.1
SRSF1Q07955 LONP1-204ENST00000586617 471 ntTSL 523.93■■□□□ 1.429e-9■■■□□ 19.1
SRSF1Q07955 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.64e-6■■■□□ 19.1
SRSF1Q07955 POLG-213ENST00000631044 4668 ntTSL 510.92□□□□□ -0.664e-6■■■□□ 19.1
SRSF1Q07955 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.724e-6■■■□□ 19.1
SRSF1Q07955 POLG-217ENST00000636774 4151 ntTSL 510.21□□□□□ -0.784e-6■■■□□ 19.1
SRSF1Q07955 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.251e-7■■■□□ 19.1
SRSF1Q07955 CENPT-201ENST00000436104 1990 ntTSL 215.72■□□□□ 0.111e-7■■■□□ 19.1
SRSF1Q07955 CENPT-207ENST00000562513 1669 ntTSL 515.54■□□□□ 0.081e-7■■■□□ 19.1
SRSF1Q07955 CENPT-210ENST00000563885 1931 ntTSL 514.4□□□□□ -0.11e-7■■■□□ 19.1
SRSF1Q07955 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.21e-7■■■□□ 19.1
SRSF1Q07955 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.53□□□□□ -0.241e-7■■■□□ 19.1
SRSF1Q07955 CENPT-218ENST00000565157 2133 ntTSL 212.79□□□□□ -0.361e-7■■■□□ 19.1
SRSF1Q07955 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.511e-7■■■□□ 19.1
SRSF1Q07955 CENPT-233ENST00000569862 2957 ntTSL 210.51□□□□□ -0.731e-7■■■□□ 19.1
SRSF1Q07955 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.116e-6■■■□□ 19.1
SRSF1Q07955 SEL1L3-209ENST00000513364 611 ntTSL 321.72■■□□□ 1.076e-6■■■□□ 19.1
SRSF1Q07955 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.026e-6■■■□□ 19.1
SRSF1Q07955 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.956e-6■■■□□ 19.1
SRSF1Q07955 C1QTNF12-205ENST00000486627 639 ntTSL 320.68■□□□□ 0.96e-6■■■□□ 19.1
SRSF1Q07955 C1QTNF12-203ENST00000468365 647 ntTSL 320.05■□□□□ 0.86e-6■■■□□ 19.1
SRSF1Q07955 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.97■□□□□ 0.636e-6■■■□□ 19.1
SRSF1Q07955 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.66■□□□□ 0.586e-6■■■□□ 19.1
SRSF1Q07955 RNASET2-207ENST00000478180 963 ntTSL 518.28■□□□□ 0.526e-6■■■□□ 19.1
SRSF1Q07955 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.77■□□□□ 0.446e-6■■■□□ 19.1
SRSF1Q07955 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.46e-6■■■□□ 19.1
SRSF1Q07955 RNASET2-204ENST00000421787 1924 ntTSL 217.32■□□□□ 0.366e-6■■■□□ 19.1
SRSF1Q07955 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.344e-11■■■□□ 19.1
SRSF1Q07955 RNASET2-201ENST00000028008 1220 ntTSL 516.55■□□□□ 0.246e-6■■■□□ 19.1
SRSF1Q07955 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.126e-6■■■□□ 19.1
SRSF1Q07955 TUBB4B-202ENST00000604929 2035 ntTSL 1 (best)15.7■□□□□ 0.16e-6■■■□□ 19.1
SRSF1Q07955 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.62■□□□□ 0.094e-11■■■□□ 19.1
SRSF1Q07955 ENO2-207ENST00000537688 547 ntTSL 515.53■□□□□ 0.081e-6■■■□□ 19.1
SRSF1Q07955 ENO2-210ENST00000539713 543 ntTSL 415.27■□□□□ 0.041e-6■■■□□ 19.1
SRSF1Q07955 CARS-209ENST00000470221 2466 ntTSL 214.64□□□□□ -0.075e-11■■■□□ 19.1
SRSF1Q07955 NEK7-205ENST00000442588 519 ntTSL 514.61□□□□□ -0.074e-11■■■□□ 19.1
SRSF1Q07955 RNASET2-202ENST00000358165 2445 ntTSL 213.53□□□□□ -0.246e-6■■■□□ 19.1
SRSF1Q07955 CARS-208ENST00000466442 2671 ntTSL 213.5□□□□□ -0.255e-11■■■□□ 19.1
SRSF1Q07955 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.256e-7■■■□□ 19.1
SRSF1Q07955 GTF3C1-211ENST00000569653 897 ntTSL 213.46□□□□□ -0.252e-7■■■□□ 19.1
SRSF1Q07955 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.326e-6■■■□□ 19.1
SRSF1Q07955 ENO2-212ENST00000542509 825 ntTSL 513□□□□□ -0.331e-6■■■□□ 19.1
SRSF1Q07955 APOL2-205ENST00000473549 579 ntTSL 412.93□□□□□ -0.345e-7■■■□□ 19.1
SRSF1Q07955 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.376e-6■■■□□ 19.1
SRSF1Q07955 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.386e-6■■■□□ 19.1
SRSF1Q07955 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.396e-7■■■□□ 19.1
SRSF1Q07955 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.444e-11■■■□□ 19.1
SRSF1Q07955 KCTD7-210ENST00000640601 855 ntTSL 512.09□□□□□ -0.476e-6■■■□□ 19.1
SRSF1Q07955 GTF3C1-209ENST00000568569 540 ntTSL 512.05□□□□□ -0.486e-6■■■□□ 19.1
SRSF1Q07955 CC2D1B-204ENST00000450942 2018 ntTSL 511.76□□□□□ -0.536e-6■■■□□ 19.1
SRSF1Q07955 GTF3C1-204ENST00000564664 933 ntTSL 511.74□□□□□ -0.532e-7■■■□□ 19.1
SRSF1Q07955 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.571e-6■■■□□ 19.1
SRSF1Q07955 APOL2-207ENST00000484830 527 ntTSL 411.47□□□□□ -0.575e-7■■■□□ 19.1
SRSF1Q07955 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC11.42□□□□□ -0.586e-6■■■□□ 19.1
SRSF1Q07955 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.616e-7■■■□□ 19.1
SRSF1Q07955 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.645e-7■■■□□ 19.1
SRSF1Q07955 KCTD7-203ENST00000449064 538 ntTSL 410.94□□□□□ -0.666e-6■■■□□ 19.1
SRSF1Q07955 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC10.94□□□□□ -0.661e-6■■■□□ 19.1
SRSF1Q07955 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC10.88□□□□□ -0.671e-6■■■□□ 19.1
SRSF1Q07955 APOL2-208ENST00000489186 579 ntTSL 310.88□□□□□ -0.675e-7■■■□□ 19.1
SRSF1Q07955 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.681e-6■■■□□ 19.1
SRSF1Q07955 MTA2-203ENST00000526844 627 ntTSL 310.64□□□□□ -0.716e-6■■■□□ 19.1
SRSF1Q07955 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.731e-6■■■□□ 19.1
SRSF1Q07955 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.756e-7■■■□□ 19.1
SRSF1Q07955 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.836e-6■■■□□ 19.1
SRSF1Q07955 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC9.84□□□□□ -0.836e-6■■■□□ 19.1
SRSF1Q07955 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC9.69□□□□□ -0.866e-7■■■□□ 19.1
SRSF1Q07955 CARS-210ENST00000484484 1151 ntTSL 59.63□□□□□ -0.875e-11■■■□□ 19.1
SRSF1Q07955 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.886e-7■■■□□ 19.1
SRSF1Q07955 GTF3C1-206ENST00000566779 645 ntTSL 39.52□□□□□ -0.896e-6■■■□□ 19.1
SRSF1Q07955 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.922e-7■■■□□ 19.1
Retrieved 100 of 14,836 protein–RNA pairs in 16.1 ms