Protein–RNA interactions for Protein: Q02260

SMD1, Small nuclear ribonucleoprotein Sm D1, yeastyeast

Predicted RBP Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD1Q02260 GAL11YOL051W 3246 nt2.95□□□□□ -1.94
SMD1Q02260 SER3YER081W 1410 nt2.95□□□□□ -1.94
SMD1Q02260 FAR10YLR238W 1437 nt2.95□□□□□ -1.94
SMD1Q02260 DBP5YOR046C 1449 nt2.95□□□□□ -1.94
SMD1Q02260 YCR016WYCR016W 873 nt2.95□□□□□ -1.94
SMD1Q02260 JAC1YGL018C 555 nt2.95□□□□□ -1.94
SMD1Q02260 TYS1YGR185C 1185 nt2.95□□□□□ -1.94
SMD1Q02260 PAN5YHR063C 1140 nt2.95□□□□□ -1.94
SMD1Q02260 PCL7YIL050W 858 nt2.95□□□□□ -1.94
SMD1Q02260 SAW1YAL027W 786 nt2.95□□□□□ -1.94
SMD1Q02260 YJR112W-AYJR112W-A 330 nt2.95□□□□□ -1.94
SMD1Q02260 IRC25YLR021W 540 nt2.95□□□□□ -1.94
SMD1Q02260 MRPS8YMR158W 468 nt2.95□□□□□ -1.94
SMD1Q02260 YOL038C-AYOL038C-A 96 nt2.95□□□□□ -1.94
SMD1Q02260 DSC2YOL073C 969 nt2.95□□□□□ -1.94
SMD1Q02260 YOR114WYOR114W 885 nt2.95□□□□□ -1.94
SMD1Q02260 YOR342CYOR342C 960 nt2.95□□□□□ -1.94
SMD1Q02260 ATG29YPL166W 642 nt2.95□□□□□ -1.94
SMD1Q02260 SSO1YPL232W 873 nt2.95□□□□□ -1.94
SMD1Q02260 HSP26YBR072W 645 nt2.95□□□□□ -1.94
SMD1Q02260 RPS9BYBR189W 588 nt2.95□□□□□ -1.94
SMD1Q02260 PUB1YNL016W 1362 nt2.95□□□□□ -1.94
SMD1Q02260 NOC2YOR206W 2133 nt2.95□□□□□ -1.94
SMD1Q02260 RTC1YOL138C 4026 nt2.95□□□□□ -1.94
SMD1Q02260 FLO8YER109C 2400 nt2.94□□□□□ -1.94
SMD1Q02260 REB1YBR049C 2433 nt2.94□□□□□ -1.94
SMD1Q02260 RDI1YDL135C 609 nt2.94□□□□□ -1.94
SMD1Q02260 SPR6YER115C 576 nt2.94□□□□□ -1.94
SMD1Q02260 LSB1YGR136W 726 nt2.94□□□□□ -1.94
SMD1Q02260 RSM25YIL093C 795 nt2.94□□□□□ -1.94
SMD1Q02260 YLR407WYLR407W 687 nt2.94□□□□□ -1.94
SMD1Q02260 YML090WYML090W 387 nt2.94□□□□□ -1.94
SMD1Q02260 MED11YMR112C 396 nt2.94□□□□□ -1.94
SMD1Q02260 ATG19YOL082W 1248 nt2.94□□□□□ -1.94
SMD1Q02260 CIN5YOR028C 888 nt2.94□□□□□ -1.94
SMD1Q02260 HSH49YOR319W 642 nt2.94□□□□□ -1.94
SMD1Q02260 RPS11BYBR048W 471 nt2.94□□□□□ -1.94
SMD1Q02260 ICY2YPL250C 411 nt2.94□□□□□ -1.94
SMD1Q02260 MCM16YPR046W 546 nt2.94□□□□□ -1.94
SMD1Q02260 YBR089WYBR089W 600 nt2.94□□□□□ -1.94
SMD1Q02260 PEP5YMR231W 3090 nt2.94□□□□□ -1.94
SMD1Q02260 RRP14YKL082C 1305 nt2.93□□□□□ -1.94
SMD1Q02260 DSS1YMR287C 2910 nt2.93□□□□□ -1.94
SMD1Q02260 SPT16YGL207W 3108 nt2.93□□□□□ -1.94
SMD1Q02260 VPS27YNR006W 1869 nt2.93□□□□□ -1.94
SMD1Q02260 YTM1YOR272W 1383 nt2.93□□□□□ -1.94
SMD1Q02260 RPC11YDR045C 333 nt2.93□□□□□ -1.94
SMD1Q02260 ARI1YGL157W 1044 nt2.93□□□□□ -1.94
SMD1Q02260 ERV29YGR284C 933 nt2.93□□□□□ -1.94
SMD1Q02260 SOL3YHR163W 750 nt2.93□□□□□ -1.94
SMD1Q02260 HYM1YKL189W 1200 nt2.93□□□□□ -1.94
SMD1Q02260 GAB1YLR459W 1185 nt2.93□□□□□ -1.94
SMD1Q02260 YIP3YNL044W 531 nt2.93□□□□□ -1.94
SMD1Q02260 SUI1YNL244C 327 nt2.93□□□□□ -1.94
SMD1Q02260 IZH4YOL101C 939 nt2.93□□□□□ -1.94
SMD1Q02260 DSL1YNL258C 2265 nt2.93□□□□□ -1.94
SMD1Q02260 KAR1YNL188W 1302 nt2.93□□□□□ -1.94
SMD1Q02260 TRP4YDR354W 1143 nt2.92□□□□□ -1.94
SMD1Q02260 RPS18AYDR450W 441 nt2.92□□□□□ -1.94
SMD1Q02260 tQ(UUG)CtQ(UUG)C 72 nt2.92□□□□□ -1.94
SMD1Q02260 tQ(UUG)D1tQ(UUG)D1 72 nt2.92□□□□□ -1.94
SMD1Q02260 tQ(UUG)D2tQ(UUG)D2 72 nt2.92□□□□□ -1.94
SMD1Q02260 tQ(UUG)D3tQ(UUG)D3 72 nt2.92□□□□□ -1.94
SMD1Q02260 tQ(UUG)E1tQ(UUG)E1 72 nt2.92□□□□□ -1.94
SMD1Q02260 tQ(UUG)HtQ(UUG)H 72 nt2.92□□□□□ -1.94
SMD1Q02260 tQ(UUG)LtQ(UUG)L 72 nt2.92□□□□□ -1.94
SMD1Q02260 YIL102C-AYIL102C-A 228 nt2.92□□□□□ -1.94
SMD1Q02260 BNA1YJR025C 534 nt2.92□□□□□ -1.94
SMD1Q02260 YJR071WYJR071W 369 nt2.92□□□□□ -1.94
SMD1Q02260 RPL14AYKL006W 417 nt2.92□□□□□ -1.94
SMD1Q02260 SED5YLR026C 1023 nt2.92□□□□□ -1.94
SMD1Q02260 NKP2YLR315W 462 nt2.92□□□□□ -1.94
SMD1Q02260 YML031C-AYML031C-A 336 nt2.92□□□□□ -1.94
SMD1Q02260 YNL171CYNL171C 369 nt2.92□□□□□ -1.94
SMD1Q02260 ELA1YNL230C 1140 nt2.92□□□□□ -1.94
SMD1Q02260 SNF8YPL002C 702 nt2.92□□□□□ -1.94
SMD1Q02260 CYM1YDR430C 2970 nt2.92□□□□□ -1.94
SMD1Q02260 HEF3YNL014W 3135 nt2.92□□□□□ -1.94
SMD1Q02260 FLC1YPL221W 2382 nt2.92□□□□□ -1.94
SMD1Q02260 RPN4YDL020C 1596 nt2.91□□□□□ -1.94
SMD1Q02260 SYT1YPR095C 3681 nt2.91□□□□□ -1.94
SMD1Q02260 VMA1YDL185W 3216 nt2.91□□□□□ -1.94
SMD1Q02260 MEK1YOR351C 1494 nt2.91□□□□□ -1.94
SMD1Q02260 TAF10YDR167W 621 nt2.91□□□□□ -1.94
SMD1Q02260 ISC10YER180C 804 nt2.91□□□□□ -1.94
SMD1Q02260 ARG3YJL088W 1017 nt2.91□□□□□ -1.94
SMD1Q02260 CNB1YKL190W 528 nt2.91□□□□□ -1.94
SMD1Q02260 RDN5-1RDN5-1 121 nt2.91□□□□□ -1.94
SMD1Q02260 RDN5-6RDN5-6 121 nt2.91□□□□□ -1.94
SMD1Q02260 YML053CYML053C 639 nt2.91□□□□□ -1.94
SMD1Q02260 PFK27YOL136C 1194 nt2.91□□□□□ -1.94
SMD1Q02260 YOR186WYOR186W 435 nt2.91□□□□□ -1.94
SMD1Q02260 PET20YPL159C 762 nt2.91□□□□□ -1.94
SMD1Q02260 YPR071WYPR071W 636 nt2.91□□□□□ -1.94
SMD1Q02260 HPA2YPR193C 471 nt2.91□□□□□ -1.94
SMD1Q02260 ARA1YBR149W 1035 nt2.91□□□□□ -1.94
SMD1Q02260 APN2YBL019W 1563 nt2.91□□□□□ -1.94
SMD1Q02260 YCF1YDR135C 4548 nt2.91□□□□□ -1.94
SMD1Q02260 DSN1YIR010W 1731 nt2.9□□□□□ -1.94
SMD1Q02260 UBP12YJL197W 3765 nt2.9□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms