Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 ECM13YBL043W 774 nt5.4□□□□□ -1.54
UBP3Q01477 CUZ1YNL155W 825 nt5.4□□□□□ -1.54
UBP3Q01477 YPR172WYPR172W 603 nt5.4□□□□□ -1.54
UBP3Q01477 PSE1YMR308C 3270 nt5.4□□□□□ -1.55
UBP3Q01477 YJR061WYJR061W 2808 nt5.39□□□□□ -1.55 RIP-Chip
UBP3Q01477 MIC60YKR016W 1623 nt5.39□□□□□ -1.55
UBP3Q01477 FAU1YER183C 636 nt5.39□□□□□ -1.55
UBP3Q01477 YGL041W-AYGL041W-A 465 nt5.39□□□□□ -1.55
UBP3Q01477 SRP21YKL122C 504 nt5.39□□□□□ -1.55
UBP3Q01477 YLR264C-AYLR264C-A 117 nt5.39□□□□□ -1.55
UBP3Q01477 ATP14YLR295C 375 nt5.39□□□□□ -1.55
UBP3Q01477 YLR334CYLR334C 381 nt5.39□□□□□ -1.55
UBP3Q01477 HLJ1YMR161W 675 nt5.39□□□□□ -1.55
UBP3Q01477 TAF14YPL129W 735 nt5.39□□□□□ -1.55
UBP3Q01477 YPR074W-AYPR074W-A 171 nt5.39□□□□□ -1.55
UBP3Q01477 YDR210W-AYDR210W-A 1317 nt5.39□□□□□ -1.55
UBP3Q01477 MAL12YGR292W 1755 nt5.39□□□□□ -1.55
UBP3Q01477 MAL32YBR299W 1755 nt5.39□□□□□ -1.55
UBP3Q01477 STV1YMR054W 2673 nt5.39□□□□□ -1.55 RIP-Chip
UBP3Q01477 ASK10YGR097W 3441 nt5.38□□□□□ -1.55
UBP3Q01477 HAP4YKL109W 1665 nt5.38□□□□□ -1.55
UBP3Q01477 RPL24AYGL031C 468 nt5.38□□□□□ -1.55
UBP3Q01477 YGL204CYGL204C 306 nt5.38□□□□□ -1.55
UBP3Q01477 RSR1YGR152C 819 nt5.38□□□□□ -1.55 RIP-Chip
UBP3Q01477 GVP36YIL041W 981 nt5.38□□□□□ -1.55
UBP3Q01477 PNP1YLR209C 936 nt5.38□□□□□ -1.55
UBP3Q01477 IMP2YMR035W 534 nt5.38□□□□□ -1.55
UBP3Q01477 SEN15YMR059W 387 nt5.38□□□□□ -1.55
UBP3Q01477 YMR158C-AYMR158C-A 138 nt5.38□□□□□ -1.55
UBP3Q01477 TRI1YMR233W 681 nt5.38□□□□□ -1.55
UBP3Q01477 SCW10YMR305C 1170 nt5.38□□□□□ -1.55
UBP3Q01477 MAP2YBL091C 1266 nt5.38□□□□□ -1.55
UBP3Q01477 YLR446WYLR446W 1302 nt5.38□□□□□ -1.55 RIP-Chip
UBP3Q01477 IMD3YLR432W 1572 nt5.38□□□□□ -1.55
UBP3Q01477 PDI1YCL043C 1569 nt5.38□□□□□ -1.55
UBP3Q01477 UBP10YNL186W 2379 nt5.37□□□□□ -1.55
UBP3Q01477 FUI1YBL042C 1920 nt5.37□□□□□ -1.55
UBP3Q01477 STE20YHL007C 2820 nt5.37□□□□□ -1.55
UBP3Q01477 MHF2YDL160C-A 243 nt5.37□□□□□ -1.55
UBP3Q01477 OST5YGL226C-A 261 nt5.37□□□□□ -1.55
UBP3Q01477 COS12YGL263W 1143 nt5.37□□□□□ -1.55
UBP3Q01477 TDA10YGR205W 873 nt5.37□□□□□ -1.55
UBP3Q01477 FMC1YIL098C 468 nt5.37□□□□□ -1.55
UBP3Q01477 YKL162CYKL162C 1209 nt5.37□□□□□ -1.55
UBP3Q01477 RLP24YLR009W 600 nt5.37□□□□□ -1.55
UBP3Q01477 MAP1YLR244C 1164 nt5.37□□□□□ -1.55
UBP3Q01477 YML057C-AYML057C-A 390 nt5.37□□□□□ -1.55
UBP3Q01477 RPC34YNR003C 954 nt5.37□□□□□ -1.55
UBP3Q01477 SSO1YPL232W 873 nt5.37□□□□□ -1.55
UBP3Q01477 CIN2YPL241C 807 nt5.37□□□□□ -1.55
UBP3Q01477 YPL261CYPL261C 309 nt5.37□□□□□ -1.55
UBP3Q01477 OPY1YBR129C 987 nt5.37□□□□□ -1.55
UBP3Q01477 VPS38YLR360W 1320 nt5.37□□□□□ -1.55
UBP3Q01477 TPO2YGR138C 1845 nt5.37□□□□□ -1.55
UBP3Q01477 HAP1YLR256W 4509 nt5.36□□□□□ -1.55 RIP-Chip
UBP3Q01477 RPL35BYDL136W 363 nt5.36□□□□□ -1.55 RIP-Chip
UBP3Q01477 SLU7YDR088C 1149 nt5.36□□□□□ -1.55 RIP-Chip
UBP3Q01477 YGL082WYGL082W 1146 nt5.36□□□□□ -1.55
UBP3Q01477 TOS8YGL096W 831 nt5.36□□□□□ -1.55
UBP3Q01477 CAX4YGR036C 720 nt5.36□□□□□ -1.55
UBP3Q01477 YGR042WYGR042W 816 nt5.36□□□□□ -1.55
UBP3Q01477 YGR293CYGR293C 462 nt5.36□□□□□ -1.55
UBP3Q01477 MMF1YIL051C 438 nt5.36□□□□□ -1.55
UBP3Q01477 YBR300CYBR300C 498 nt5.36□□□□□ -1.55
UBP3Q01477 YHR202WYHR202W 1809 nt5.36□□□□□ -1.55 RIP-Chip
UBP3Q01477 GAL4YPL248C 2646 nt5.36□□□□□ -1.55
UBP3Q01477 MSH1YHR120W 2880 nt5.35□□□□□ -1.55 RIP-Chip
UBP3Q01477 THI7YLR237W 1797 nt5.35□□□□□ -1.55
UBP3Q01477 URK1YNR012W 1506 nt5.35□□□□□ -1.55 RIP-Chip
UBP3Q01477 NOP58YOR310C 1536 nt5.35□□□□□ -1.55
UBP3Q01477 NOP16YER002W 696 nt5.35□□□□□ -1.55
UBP3Q01477 TAN1YGL232W 870 nt5.35□□□□□ -1.55
UBP3Q01477 YGR064WYGR064W 369 nt5.35□□□□□ -1.55
UBP3Q01477 PUS6YGR169C 1215 nt5.35□□□□□ -1.55
UBP3Q01477 YHL046W-AYHL046W-A 327 nt5.35□□□□□ -1.55
UBP3Q01477 YIL082WYIL082W 873 nt5.35□□□□□ -1.55
UBP3Q01477 FUN19YAL034C 1242 nt5.35□□□□□ -1.55
UBP3Q01477 YAR023CYAR023C 540 nt5.35□□□□□ -1.55
UBP3Q01477 YMR099CYMR099C 894 nt5.35□□□□□ -1.55
UBP3Q01477 IZH2YOL002C 954 nt5.35□□□□□ -1.55
UBP3Q01477 snR10snR10 245 nt5.35□□□□□ -1.55
UBP3Q01477 DAL81YIR023W 2913 nt5.35□□□□□ -1.55 RIP-Chip
UBP3Q01477 GDB1YPR184W 4611 nt5.35□□□□□ -1.55
UBP3Q01477 SBE2YDR351W 2595 nt5.35□□□□□ -1.55
UBP3Q01477 BCH2YKR027W 2298 nt5.35□□□□□ -1.55 RIP-Chip
UBP3Q01477 AVT1YJR001W 1809 nt5.34□□□□□ -1.55
UBP3Q01477 TOS3YGL179C 1683 nt5.34□□□□□ -1.55
UBP3Q01477 MMT2YPL224C 1455 nt5.34□□□□□ -1.55
UBP3Q01477 URC2YDR520C 2319 nt5.34□□□□□ -1.55
UBP3Q01477 CLG1YGL215W 1359 nt5.34□□□□□ -1.55 RIP-Chip
UBP3Q01477 GCN5YGR252W 1320 nt5.34□□□□□ -1.55
UBP3Q01477 RPL13AYDL082W 600 nt5.34□□□□□ -1.55 RIP-Chip
UBP3Q01477 LRS4YDR439W 1044 nt5.34□□□□□ -1.55
UBP3Q01477 YGR035W-AYGR035W-A 222 nt5.34□□□□□ -1.55
UBP3Q01477 NSG1YHR133C 876 nt5.34□□□□□ -1.55
UBP3Q01477 RRN9YMR270C 1098 nt5.34□□□□□ -1.55
UBP3Q01477 FDH2YPL275W 711 nt5.34□□□□□ -1.55
UBP3Q01477 YPR078CYPR078C 1119 nt5.34□□□□□ -1.55
UBP3Q01477 RIB5YBR256C 717 nt5.34□□□□□ -1.55
UBP3Q01477 RPS11AYDR025W 471 nt5.33□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 27.9 ms