Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CDH13P55290 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.24■□□□□ 0.99
CDH13P55290 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH13P55290 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.24■□□□□ 0.99
CDH13P55290 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH13P55290 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.24■□□□□ 0.99
CDH13P55290 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CDH13P55290 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH13P55290 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.24■□□□□ 0.99
CDH13P55290 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH13P55290 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH13P55290 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.23■□□□□ 0.99
CDH13P55290 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH13P55290 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH13P55290 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH13P55290 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH13P55290 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH13P55290 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH13P55290 AC006455.2-201ENST00000429931 906 ntBASIC21.23■□□□□ 0.99
CDH13P55290 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.23■□□□□ 0.99
CDH13P55290 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CDH13P55290 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.23■□□□□ 0.99
CDH13P55290 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH13P55290 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDH13P55290 FAM99A-202ENST00000538190 1989 ntBASIC21.23■□□□□ 0.99
CDH13P55290 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CDH13P55290 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.23■□□□□ 0.99
CDH13P55290 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH13P55290 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.22■□□□□ 0.99
CDH13P55290 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.22■□□□□ 0.99
CDH13P55290 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH13P55290 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH13P55290 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH13P55290 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.22■□□□□ 0.99
CDH13P55290 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH13P55290 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH13P55290 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDH13P55290 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDH13P55290 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.22■□□□□ 0.99
CDH13P55290 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH13P55290 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH13P55290 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH13P55290 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH13P55290 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH13P55290 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH13P55290 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH13P55290 AC241377.3-202ENST00000626088 1088 ntBASIC21.21■□□□□ 0.99
CDH13P55290 AC241585.3-202ENST00000628937 1088 ntBASIC21.21■□□□□ 0.99
CDH13P55290 AC245100.8-202ENST00000629247 1058 ntBASIC21.21■□□□□ 0.99
CDH13P55290 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH13P55290 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH13P55290 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH13P55290 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH13P55290 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CDH13P55290 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDH13P55290 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH13P55290 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CDH13P55290 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDH13P55290 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.21■□□□□ 0.99
CDH13P55290 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.2■□□□□ 0.99
CDH13P55290 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH13P55290 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDH13P55290 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CDH13P55290 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH13P55290 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CDH13P55290 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH13P55290 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH13P55290 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.2■□□□□ 0.98
CDH13P55290 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.2■□□□□ 0.98
CDH13P55290 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDH13P55290 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH13P55290 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CDH13P55290 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH13P55290 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CDH13P55290 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH13P55290 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH13P55290 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CDH13P55290 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH13P55290 GUSBP5-201ENST00000418136 578 ntBASIC21.19■□□□□ 0.98
CDH13P55290 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CDH13P55290 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDH13P55290 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH13P55290 AC099791.2-201ENST00000605725 427 ntBASIC21.19■□□□□ 0.98
CDH13P55290 pRNA.6-201ENST00000610482 90 ntBASIC21.19■□□□□ 0.98
CDH13P55290 pRNA.5-201ENST00000612139 90 ntBASIC21.19■□□□□ 0.98
CDH13P55290 pRNA.11-201ENST00000618423 90 ntBASIC21.19■□□□□ 0.98
CDH13P55290 pRNA.13-201ENST00000619112 90 ntBASIC21.19■□□□□ 0.98
CDH13P55290 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.19■□□□□ 0.98
CDH13P55290 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CDH13P55290 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH13P55290 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CDH13P55290 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CDH13P55290 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDH13P55290 AC133637.1-201ENST00000624115 1537 ntBASIC21.19■□□□□ 0.98
CDH13P55290 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDH13P55290 AC026310.3-201ENST00000625186 2373 ntBASIC21.18■□□□□ 0.98
CDH13P55290 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH13P55290 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH13P55290 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDH13P55290 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms