Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.7■□□□□ 0.42
CEACAM3P40198 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.7■□□□□ 0.42
CEACAM3P40198 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CEACAM3P40198 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CEACAM3P40198 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.69■□□□□ 0.42
CEACAM3P40198 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEACAM3P40198 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEACAM3P40198 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CEACAM3P40198 SUDS3P1-201ENST00000505831 966 ntBASIC17.69■□□□□ 0.42
CEACAM3P40198 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CEACAM3P40198 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CEACAM3P40198 AL136967.2-201ENST00000623968 743 ntBASIC17.69■□□□□ 0.42
CEACAM3P40198 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.69■□□□□ 0.42
CEACAM3P40198 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEACAM3P40198 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEACAM3P40198 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CEACAM3P40198 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.69■□□□□ 0.42
CEACAM3P40198 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEACAM3P40198 C9orf163-202ENST00000624034 2573 ntBASIC17.69■□□□□ 0.42
CEACAM3P40198 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CEACAM3P40198 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.68■□□□□ 0.42
CEACAM3P40198 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CEACAM3P40198 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CEACAM3P40198 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CEACAM3P40198 CLDN5-201ENST00000403084 2357 ntBASIC17.68■□□□□ 0.42
CEACAM3P40198 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
CEACAM3P40198 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CEACAM3P40198 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CEACAM3P40198 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CEACAM3P40198 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC17.68■□□□□ 0.42
CEACAM3P40198 IGHV3-19-201ENST00000521488 291 ntBASIC17.68■□□□□ 0.42
CEACAM3P40198 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CEACAM3P40198 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CEACAM3P40198 CA15P2-201ENST00000611168 834 ntBASIC17.68■□□□□ 0.42
CEACAM3P40198 AC079834.2-201ENST00000609776 1949 ntBASIC17.68■□□□□ 0.42
CEACAM3P40198 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CEACAM3P40198 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CEACAM3P40198 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.68■□□□□ 0.42
CEACAM3P40198 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CEACAM3P40198 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.67■□□□□ 0.42
CEACAM3P40198 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CEACAM3P40198 AC068473.5-201ENST00000616428 2072 ntBASIC17.67■□□□□ 0.42
CEACAM3P40198 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CEACAM3P40198 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CEACAM3P40198 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CEACAM3P40198 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CEACAM3P40198 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CEACAM3P40198 C1orf229-201ENST00000623686 2258 ntBASIC17.67■□□□□ 0.42
CEACAM3P40198 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CEACAM3P40198 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CEACAM3P40198 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CEACAM3P40198 AL031432.3-201ENST00000607698 485 ntBASIC17.67■□□□□ 0.42
CEACAM3P40198 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CEACAM3P40198 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CEACAM3P40198 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17.67■□□□□ 0.42
CEACAM3P40198 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CEACAM3P40198 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CEACAM3P40198 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CEACAM3P40198 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CEACAM3P40198 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.67■□□□□ 0.42
CEACAM3P40198 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CEACAM3P40198 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.67■□□□□ 0.42
CEACAM3P40198 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CEACAM3P40198 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CEACAM3P40198 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CEACAM3P40198 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CEACAM3P40198 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.66■□□□□ 0.42
CEACAM3P40198 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.66■□□□□ 0.42
CEACAM3P40198 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.66■□□□□ 0.42
CEACAM3P40198 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CEACAM3P40198 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CEACAM3P40198 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.66■□□□□ 0.42
CEACAM3P40198 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CEACAM3P40198 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CEACAM3P40198 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CEACAM3P40198 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CEACAM3P40198 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CEACAM3P40198 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CEACAM3P40198 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CEACAM3P40198 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CEACAM3P40198 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CEACAM3P40198 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CEACAM3P40198 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CEACAM3P40198 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CEACAM3P40198 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CEACAM3P40198 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CEACAM3P40198 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
CEACAM3P40198 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.65■□□□□ 0.42
CEACAM3P40198 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CEACAM3P40198 OXCT2P1-201ENST00000447263 1535 ntBASIC17.65■□□□□ 0.42
CEACAM3P40198 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.65■□□□□ 0.42
CEACAM3P40198 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
CEACAM3P40198 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CEACAM3P40198 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CEACAM3P40198 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CEACAM3P40198 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CEACAM3P40198 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
CEACAM3P40198 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CEACAM3P40198 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CEACAM3P40198 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms