Protein–RNA interactions for Protein: P25655

CDC39, General negative regulator of transcription subunit 1, yeastyeast

Known RBP Predictions only

Length 2,108 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC39P25655 YRM1YOR172W 2361 nt2.72□□□□□ -1.97
CDC39P25655 YDL109CYDL109C 1944 nt2.72□□□□□ -1.97
CDC39P25655 NKP1YDR383C 717 nt2.72□□□□□ -1.97
CDC39P25655 PAN5YHR063C 1140 nt2.72□□□□□ -1.97
CDC39P25655 COX2Q0250 756 nt2.72□□□□□ -1.97
CDC39P25655 PIR1YKL164C 1026 nt2.72□□□□□ -1.97
CDC39P25655 ERG2YMR202W 669 nt2.72□□□□□ -1.97
CDC39P25655 NAT3YPR131C 588 nt2.72□□□□□ -1.97
CDC39P25655 SPT4YGR063C 309 nt2.71□□□□□ -1.98
CDC39P25655 SAE3YHR079C-A 276 nt2.71□□□□□ -1.98
CDC39P25655 IBD2YNL164C 1056 nt2.71□□□□□ -1.98
CDC39P25655 GCD1YOR260W 1737 nt2.71□□□□□ -1.98
CDC39P25655 OCT1YKL134C 2319 nt2.71□□□□□ -1.98
CDC39P25655 RPN5YDL147W 1338 nt2.71□□□□□ -1.98
CDC39P25655 SYF1YDR416W 2580 nt2.71□□□□□ -1.98
CDC39P25655 RPL8BYLL045C 771 nt2.71□□□□□ -1.98
CDC39P25655 YLR297WYLR297W 390 nt2.71□□□□□ -1.98
CDC39P25655 VPS21YOR089C 633 nt2.71□□□□□ -1.98
CDC39P25655 RGC1YPR115W 3252 nt2.7□□□□□ -1.98
CDC39P25655 LAP3YNL239W 1365 nt2.7□□□□□ -1.98
CDC39P25655 NGL3YML118W 1518 nt2.7□□□□□ -1.98
CDC39P25655 VAS1YGR094W 3315 nt2.7□□□□□ -1.98
CDC39P25655 HMLALPHA1YCL066W 528 nt2.7□□□□□ -1.98
CDC39P25655 MATALPHA1YCR040W 528 nt2.7□□□□□ -1.98
CDC39P25655 RTT103YDR289C 1230 nt2.7□□□□□ -1.98
CDC39P25655 SPI1YER150W 447 nt2.7□□□□□ -1.98
CDC39P25655 ERG26YGL001C 1050 nt2.7□□□□□ -1.98
CDC39P25655 BCD1YHR040W 1101 nt2.7□□□□□ -1.98
CDC39P25655 YIL028WYIL028W 399 nt2.7□□□□□ -1.98
CDC39P25655 RPC37YKR025W 849 nt2.7□□□□□ -1.98
CDC39P25655 YLR036CYLR036C 612 nt2.7□□□□□ -1.98
CDC39P25655 COA4YLR218C 453 nt2.7□□□□□ -1.98
CDC39P25655 MRPL16YBL038W 699 nt2.7□□□□□ -1.98
CDC39P25655 SET6YPL165C 1122 nt2.7□□□□□ -1.98
CDC39P25655 PBP2YBR233W 1242 nt2.7□□□□□ -1.98
CDC39P25655 SMC3YJL074C 3693 nt2.7□□□□□ -1.98
CDC39P25655 UBP6YFR010W 1500 nt2.7□□□□□ -1.98
CDC39P25655 MCD4YKL165C 2760 nt2.7□□□□□ -1.98
CDC39P25655 NSA2YER126C 786 nt2.69□□□□□ -1.98
CDC39P25655 YIL054WYIL054W 318 nt2.69□□□□□ -1.98
CDC39P25655 MFM1YPL060W 1242 nt2.69□□□□□ -1.98
CDC39P25655 ARG5,6YER069W 2592 nt2.69□□□□□ -1.98
CDC39P25655 SPR28YDR218C 1272 nt2.69□□□□□ -1.98
CDC39P25655 YDR274CYDR274C 372 nt2.69□□□□□ -1.98
CDC39P25655 PUG1YER185W 912 nt2.69□□□□□ -1.98
CDC39P25655 tQ(UUG)BtQ(UUG)B 72 nt2.69□□□□□ -1.98
CDC39P25655 NIT3YLR351C 876 nt2.69□□□□□ -1.98
CDC39P25655 YMR086C-AYMR086C-A 339 nt2.69□□□□□ -1.98
CDC39P25655 POL31YJR006W 1464 nt2.69□□□□□ -1.98
CDC39P25655 FUN30YAL019W 3396 nt2.68□□□□□ -1.98
CDC39P25655 YCL075WYCL075W 441 nt2.68□□□□□ -1.98
CDC39P25655 PSF1YDR013W 627 nt2.68□□□□□ -1.98
CDC39P25655 MIG3YER028C 1185 nt2.68□□□□□ -1.98
CDC39P25655 PML1YLR016C 615 nt2.68□□□□□ -1.98
CDC39P25655 UNG1YML021C 1080 nt2.68□□□□□ -1.98
CDC39P25655 UGA3YDL170W 1587 nt2.68□□□□□ -1.98
CDC39P25655 SDS23YGL056C 1584 nt2.68□□□□□ -1.98
CDC39P25655 MSN4YKL062W 1893 nt2.68□□□□□ -1.98
CDC39P25655 DEG1YFL001W 1329 nt2.68□□□□□ -1.98
CDC39P25655 REB1YBR049C 2433 nt2.68□□□□□ -1.98
CDC39P25655 BYE1YKL005C 1785 nt2.68□□□□□ -1.98
CDC39P25655 JJJ1YNL227C 1773 nt2.68□□□□□ -1.98
CDC39P25655 CDC26YFR036W 375 nt2.68□□□□□ -1.98
CDC39P25655 DOG2YHR043C 741 nt2.68□□□□□ -1.98
CDC39P25655 IES3YLR052W 753 nt2.68□□□□□ -1.98
CDC39P25655 DIB1YPR082C 432 nt2.68□□□□□ -1.98
CDC39P25655 YHR202WYHR202W 1809 nt2.67□□□□□ -1.98
CDC39P25655 OPT2YPR194C 2634 nt2.67□□□□□ -1.98
CDC39P25655 APP1YNL094W 1764 nt2.67□□□□□ -1.98
CDC39P25655 SLM5YCR024C 1479 nt2.67□□□□□ -1.98
CDC39P25655 YCR050CYCR050C 309 nt2.67□□□□□ -1.98
CDC39P25655 YFR045WYFR045W 930 nt2.67□□□□□ -1.98
CDC39P25655 COS8YHL048W 1146 nt2.67□□□□□ -1.98
CDC39P25655 SWP1YMR149W 861 nt2.67□□□□□ -1.98
CDC39P25655 YOL035CYOL035C 303 nt2.67□□□□□ -1.98
CDC39P25655 YME2YMR302C 2553 nt2.67□□□□□ -1.98
CDC39P25655 SUP45YBR143C 1314 nt2.67□□□□□ -1.98
CDC39P25655 GAS5YOL030W 1455 nt2.67□□□□□ -1.98
CDC39P25655 RAD55YDR076W 1221 nt2.66□□□□□ -1.98
CDC39P25655 YGL188CYGL188C 174 nt2.66□□□□□ -1.98
CDC39P25655 YBR196C-BYBR196C-B 105 nt2.66□□□□□ -1.98
CDC39P25655 FAR1YJL157C 2493 nt2.66□□□□□ -1.98
CDC39P25655 RRT7YLL030C 342 nt2.66□□□□□ -1.98
CDC39P25655 UIP3YAR027W 708 nt2.66□□□□□ -1.98
CDC39P25655 SIZ1YDR409W 2715 nt2.66□□□□□ -1.98
CDC39P25655 ENT1YDL161W 1365 nt2.65□□□□□ -1.98
CDC39P25655 RRP5YMR229C 5190 nt2.65□□□□□ -1.98
CDC39P25655 CFD1YIL003W 882 nt2.65□□□□□ -1.98
CDC39P25655 RPS22AYJL190C 393 nt2.65□□□□□ -1.98
CDC39P25655 SWC7YLR385C 399 nt2.65□□□□□ -1.98
CDC39P25655 IMH1YLR309C 2736 nt2.65□□□□□ -1.99
CDC39P25655 PEP7YDR323C 1548 nt2.65□□□□□ -1.99
CDC39P25655 TMA108YIL137C 2841 nt2.65□□□□□ -1.99
CDC39P25655 IMD4YML056C 1575 nt2.65□□□□□ -1.99
CDC39P25655 BMS1YPL217C 3552 nt2.65□□□□□ -1.99
CDC39P25655 RPL23BYER117W 414 nt2.65□□□□□ -1.99
CDC39P25655 ATP12YJL180C 978 nt2.65□□□□□ -1.99
CDC39P25655 YJR020WYJR020W 333 nt2.65□□□□□ -1.99
CDC39P25655 YLR428CYLR428C 345 nt2.65□□□□□ -1.99
CDC39P25655 MSN1YOL116W 1149 nt2.65□□□□□ -1.99
Retrieved 100 of 7,029 protein–RNA pairs in 20.3 ms