Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 pRNA.13-201ENST00000619112 90 ntBASIC21.05■□□□□ 0.96
KRT6AP02538 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT6AP02538 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT6AP02538 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT6AP02538 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT6AP02538 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.05■□□□□ 0.96
KRT6AP02538 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT6AP02538 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT6AP02538 AC133637.1-201ENST00000624115 1537 ntBASIC21.04■□□□□ 0.96
KRT6AP02538 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT6AP02538 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT6AP02538 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT6AP02538 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT6AP02538 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT6AP02538 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
KRT6AP02538 AC099791.2-201ENST00000605725 427 ntBASIC21.04■□□□□ 0.96
KRT6AP02538 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.04■□□□□ 0.96
KRT6AP02538 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT6AP02538 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.04■□□□□ 0.96
KRT6AP02538 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.04■□□□□ 0.96
KRT6AP02538 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT6AP02538 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT6AP02538 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT6AP02538 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT6AP02538 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
KRT6AP02538 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
KRT6AP02538 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
KRT6AP02538 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
KRT6AP02538 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT6AP02538 AC006455.2-201ENST00000429931 906 ntBASIC21.03■□□□□ 0.96
KRT6AP02538 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.03■□□□□ 0.96
KRT6AP02538 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.03■□□□□ 0.96
KRT6AP02538 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
KRT6AP02538 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
KRT6AP02538 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.03■□□□□ 0.96
KRT6AP02538 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT6AP02538 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KRT6AP02538 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KRT6AP02538 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT6AP02538 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KRT6AP02538 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT6AP02538 AC092171.4-201ENST00000609130 632 ntBASIC21.02■□□□□ 0.96
KRT6AP02538 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT6AP02538 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT6AP02538 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KRT6AP02538 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.02■□□□□ 0.96
KRT6AP02538 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
KRT6AP02538 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
KRT6AP02538 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
KRT6AP02538 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT6AP02538 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT6AP02538 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT6AP02538 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
KRT6AP02538 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT6AP02538 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.01■□□□□ 0.95
KRT6AP02538 SRD5A1P1-201ENST00000442297 786 ntBASIC21.01■□□□□ 0.95
KRT6AP02538 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.01■□□□□ 0.95
KRT6AP02538 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
KRT6AP02538 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT6AP02538 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KRT6AP02538 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.01■□□□□ 0.95
KRT6AP02538 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KRT6AP02538 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT6AP02538 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
KRT6AP02538 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KRT6AP02538 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT6AP02538 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21■□□□□ 0.95
KRT6AP02538 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
KRT6AP02538 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT6AP02538 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT6AP02538 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21■□□□□ 0.95
KRT6AP02538 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KRT6AP02538 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
KRT6AP02538 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT6AP02538 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT6AP02538 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KRT6AP02538 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT6AP02538 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.99■□□□□ 0.95
KRT6AP02538 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT6AP02538 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.99■□□□□ 0.95
KRT6AP02538 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT6AP02538 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT6AP02538 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KRT6AP02538 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT6AP02538 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.98■□□□□ 0.95
KRT6AP02538 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.98■□□□□ 0.95
KRT6AP02538 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.98■□□□□ 0.95
KRT6AP02538 AL031602.1-201ENST00000633169 911 ntBASIC20.98■□□□□ 0.95
KRT6AP02538 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.98■□□□□ 0.95
KRT6AP02538 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT6AP02538 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
KRT6AP02538 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT6AP02538 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KRT6AP02538 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.97■□□□□ 0.95
KRT6AP02538 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KRT6AP02538 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KRT6AP02538 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
KRT6AP02538 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.97■□□□□ 0.95
KRT6AP02538 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
KRT6AP02538 MIR3181-201ENST00000578512 73 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms