Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZIC3O60481 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.65■□□□□ 0.74
ZIC3O60481 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ZIC3O60481 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.65■□□□□ 0.74
ZIC3O60481 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZIC3O60481 MIR6821-201ENST00000617625 74 ntBASIC19.65■□□□□ 0.74
ZIC3O60481 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZIC3O60481 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZIC3O60481 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.64■□□□□ 0.74
ZIC3O60481 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZIC3O60481 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZIC3O60481 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZIC3O60481 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.64■□□□□ 0.73
ZIC3O60481 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZIC3O60481 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.64■□□□□ 0.73
ZIC3O60481 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.64■□□□□ 0.73
ZIC3O60481 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.64■□□□□ 0.73
ZIC3O60481 ESRRAP2-201ENST00000418437 1549 ntBASIC19.64■□□□□ 0.73
ZIC3O60481 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ZIC3O60481 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZIC3O60481 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZIC3O60481 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZIC3O60481 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZIC3O60481 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZIC3O60481 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ZIC3O60481 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZIC3O60481 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.63■□□□□ 0.73
ZIC3O60481 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ZIC3O60481 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZIC3O60481 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.63■□□□□ 0.73
ZIC3O60481 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.63■□□□□ 0.73
ZIC3O60481 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZIC3O60481 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZIC3O60481 LINC00526-201ENST00000581067 1875 ntBASIC19.62■□□□□ 0.73
ZIC3O60481 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.62■□□□□ 0.73
ZIC3O60481 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC3O60481 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC3O60481 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC3O60481 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC3O60481 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC3O60481 YBX1P1-201ENST00000445822 960 ntBASIC19.62■□□□□ 0.73
ZIC3O60481 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.62■□□□□ 0.73
ZIC3O60481 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC3O60481 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.62■□□□□ 0.73
ZIC3O60481 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC3O60481 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC3O60481 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.62■□□□□ 0.73
ZIC3O60481 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC3O60481 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ZIC3O60481 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC3O60481 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC3O60481 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ZIC3O60481 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC3O60481 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.61■□□□□ 0.73
ZIC3O60481 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.61■□□□□ 0.73
ZIC3O60481 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ZIC3O60481 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC3O60481 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC3O60481 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC3O60481 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC3O60481 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.61■□□□□ 0.73
ZIC3O60481 AC123595.1-201ENST00000440769 1046 ntBASIC19.61■□□□□ 0.73
ZIC3O60481 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.61■□□□□ 0.73
ZIC3O60481 AC087623.3-201ENST00000607047 1098 ntBASIC19.61■□□□□ 0.73
ZIC3O60481 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ZIC3O60481 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.61■□□□□ 0.73
ZIC3O60481 BX005040.4-201ENST00000637145 1518 ntBASIC19.61■□□□□ 0.73
ZIC3O60481 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
ZIC3O60481 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZIC3O60481 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ZIC3O60481 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.6■□□□□ 0.73
ZIC3O60481 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
ZIC3O60481 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.6■□□□□ 0.73
ZIC3O60481 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZIC3O60481 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
ZIC3O60481 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
ZIC3O60481 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.6■□□□□ 0.73
ZIC3O60481 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZIC3O60481 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZIC3O60481 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ZIC3O60481 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.6■□□□□ 0.73
ZIC3O60481 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.59■□□□□ 0.73
ZIC3O60481 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ZIC3O60481 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZIC3O60481 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZIC3O60481 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZIC3O60481 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZIC3O60481 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZIC3O60481 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.59■□□□□ 0.73
ZIC3O60481 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ZIC3O60481 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
ZIC3O60481 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZIC3O60481 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZIC3O60481 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.59■□□□□ 0.73
ZIC3O60481 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.59■□□□□ 0.73
ZIC3O60481 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.59■□□□□ 0.73
ZIC3O60481 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZIC3O60481 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZIC3O60481 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZIC3O60481 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms