Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 AC105265.2-201ENST00000467189 838 ntBASIC18.13■□□□□ 0.49
NDUFB3O43676 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NDUFB3O43676 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFB3O43676 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFB3O43676 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFB3O43676 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NDUFB3O43676 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFB3O43676 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NDUFB3O43676 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NDUFB3O43676 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFB3O43676 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NDUFB3O43676 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFB3O43676 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFB3O43676 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NDUFB3O43676 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFB3O43676 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
NDUFB3O43676 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFB3O43676 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.12■□□□□ 0.49
NDUFB3O43676 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.12■□□□□ 0.49
NDUFB3O43676 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFB3O43676 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFB3O43676 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFB3O43676 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFB3O43676 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NDUFB3O43676 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NDUFB3O43676 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFB3O43676 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFB3O43676 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFB3O43676 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NDUFB3O43676 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.11■□□□□ 0.49
NDUFB3O43676 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFB3O43676 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.11■□□□□ 0.49
NDUFB3O43676 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.11■□□□□ 0.49
NDUFB3O43676 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFB3O43676 AC019069.1-201ENST00000610008 1333 ntBASIC18.11■□□□□ 0.49
NDUFB3O43676 OXCT2P1-201ENST00000447263 1535 ntBASIC18.11■□□□□ 0.49
NDUFB3O43676 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFB3O43676 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFB3O43676 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFB3O43676 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFB3O43676 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFB3O43676 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.11■□□□□ 0.49
NDUFB3O43676 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
NDUFB3O43676 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.1■□□□□ 0.49
NDUFB3O43676 AC068473.5-201ENST00000616428 2072 ntBASIC18.1■□□□□ 0.49
NDUFB3O43676 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.1■□□□□ 0.49
NDUFB3O43676 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.1■□□□□ 0.49
NDUFB3O43676 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
NDUFB3O43676 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NDUFB3O43676 AC087742.1-201ENST00000575880 1738 ntBASIC18.1■□□□□ 0.49
NDUFB3O43676 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
NDUFB3O43676 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDUFB3O43676 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NDUFB3O43676 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDUFB3O43676 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.1■□□□□ 0.49
NDUFB3O43676 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDUFB3O43676 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.1■□□□□ 0.49
NDUFB3O43676 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.1■□□□□ 0.49
NDUFB3O43676 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.1■□□□□ 0.49
NDUFB3O43676 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NDUFB3O43676 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NDUFB3O43676 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.1■□□□□ 0.49
NDUFB3O43676 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NDUFB3O43676 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDUFB3O43676 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.09■□□□□ 0.49
NDUFB3O43676 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDUFB3O43676 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.09■□□□□ 0.49
NDUFB3O43676 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NDUFB3O43676 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NDUFB3O43676 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.09■□□□□ 0.49
NDUFB3O43676 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.09■□□□□ 0.49
NDUFB3O43676 AC079089.2-201ENST00000531211 1277 ntBASIC18.09■□□□□ 0.49
NDUFB3O43676 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.09■□□□□ 0.49
NDUFB3O43676 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDUFB3O43676 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.09■□□□□ 0.49
NDUFB3O43676 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NDUFB3O43676 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NDUFB3O43676 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
NDUFB3O43676 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.08■□□□□ 0.49
NDUFB3O43676 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
NDUFB3O43676 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NDUFB3O43676 IRS3P-201ENST00000223076 1006 ntBASIC18.08■□□□□ 0.48
NDUFB3O43676 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.08■□□□□ 0.48
NDUFB3O43676 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.08■□□□□ 0.48
NDUFB3O43676 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.08■□□□□ 0.48
NDUFB3O43676 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.08■□□□□ 0.48
NDUFB3O43676 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.08■□□□□ 0.48
NDUFB3O43676 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDUFB3O43676 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NDUFB3O43676 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFB3O43676 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFB3O43676 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFB3O43676 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
NDUFB3O43676 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.07■□□□□ 0.48
NDUFB3O43676 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFB3O43676 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NDUFB3O43676 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFB3O43676 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFB3O43676 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NDUFB3O43676 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms