Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-8O15522 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-8O15522 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-8O15522 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NKX2-8O15522 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-8O15522 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NKX2-8O15522 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.24■□□□□ 0.83
NKX2-8O15522 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.24■□□□□ 0.83
NKX2-8O15522 KRT87P-202ENST00000534226 1464 ntBASIC20.24■□□□□ 0.83
NKX2-8O15522 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
NKX2-8O15522 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.23■□□□□ 0.83
NKX2-8O15522 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.23■□□□□ 0.83
NKX2-8O15522 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NKX2-8O15522 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NKX2-8O15522 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NKX2-8O15522 TSPY20P-201ENST00000450910 630 ntBASIC20.23■□□□□ 0.83
NKX2-8O15522 DUX4L16-201ENST00000555130 1264 ntBASIC20.23■□□□□ 0.83
NKX2-8O15522 ABCB10P4-201ENST00000566803 2184 ntBASIC20.23■□□□□ 0.83
NKX2-8O15522 AC142086.2-201ENST00000569753 217 ntBASIC20.23■□□□□ 0.83
NKX2-8O15522 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NKX2-8O15522 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.23■□□□□ 0.83
NKX2-8O15522 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
NKX2-8O15522 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NKX2-8O15522 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
NKX2-8O15522 AC009237.3-201ENST00000393279 1427 ntBASIC20.22■□□□□ 0.83
NKX2-8O15522 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
NKX2-8O15522 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NKX2-8O15522 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.22■□□□□ 0.83
NKX2-8O15522 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NKX2-8O15522 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NKX2-8O15522 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.22■□□□□ 0.83
NKX2-8O15522 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NKX2-8O15522 AC231657.2-201ENST00000624556 255 ntBASIC20.22■□□□□ 0.83
NKX2-8O15522 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NKX2-8O15522 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NKX2-8O15522 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.22■□□□□ 0.83
NKX2-8O15522 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
NKX2-8O15522 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NKX2-8O15522 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NKX2-8O15522 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
NKX2-8O15522 DUSP8P3-201ENST00000399571 1760 ntBASIC20.21■□□□□ 0.83
NKX2-8O15522 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.21■□□□□ 0.83
NKX2-8O15522 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NKX2-8O15522 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NKX2-8O15522 AC007322.1-201ENST00000426983 750 ntBASIC20.21■□□□□ 0.83
NKX2-8O15522 TSPY6P-201ENST00000448518 926 ntBASIC20.21■□□□□ 0.83
NKX2-8O15522 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.21■□□□□ 0.83
NKX2-8O15522 UBE2DNL-204ENST00000602536 740 ntBASIC20.21■□□□□ 0.83
NKX2-8O15522 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.21■□□□□ 0.83
NKX2-8O15522 AC005181.1-201ENST00000604782 1256 ntBASIC20.21■□□□□ 0.83
NKX2-8O15522 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NKX2-8O15522 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NKX2-8O15522 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NKX2-8O15522 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NKX2-8O15522 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.21■□□□□ 0.83
NKX2-8O15522 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NKX2-8O15522 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-8O15522 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-8O15522 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.2■□□□□ 0.82
NKX2-8O15522 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-8O15522 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-8O15522 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-8O15522 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-8O15522 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NKX2-8O15522 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-8O15522 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-8O15522 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.2■□□□□ 0.82
NKX2-8O15522 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.2■□□□□ 0.82
NKX2-8O15522 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NKX2-8O15522 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.2■□□□□ 0.82
NKX2-8O15522 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.2■□□□□ 0.82
NKX2-8O15522 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.2■□□□□ 0.82
NKX2-8O15522 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-8O15522 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.2■□□□□ 0.82
NKX2-8O15522 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-8O15522 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-8O15522 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NKX2-8O15522 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NKX2-8O15522 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKX2-8O15522 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKX2-8O15522 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKX2-8O15522 AL139125.2-201ENST00000623134 1869 ntBASIC20.19■□□□□ 0.82
NKX2-8O15522 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NKX2-8O15522 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.18■□□□□ 0.82
NKX2-8O15522 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NKX2-8O15522 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.18■□□□□ 0.82
NKX2-8O15522 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NKX2-8O15522 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NKX2-8O15522 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NKX2-8O15522 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NKX2-8O15522 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NKX2-8O15522 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NKX2-8O15522 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.18■□□□□ 0.82
NKX2-8O15522 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NKX2-8O15522 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.18■□□□□ 0.82
NKX2-8O15522 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.18■□□□□ 0.82
NKX2-8O15522 AL138781.1-201ENST00000566567 1274 ntBASIC20.18■□□□□ 0.82
NKX2-8O15522 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.18■□□□□ 0.82
NKX2-8O15522 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NKX2-8O15522 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms