Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD9O15198 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMAD9O15198 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
SMAD9O15198 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SMAD9O15198 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SMAD9O15198 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SMAD9O15198 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.65■□□□□ 0.74
SMAD9O15198 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMAD9O15198 AC142381.2-201ENST00000566120 298 ntBASIC19.65■□□□□ 0.74
SMAD9O15198 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.65■□□□□ 0.74
SMAD9O15198 AL136967.2-201ENST00000623968 743 ntBASIC19.65■□□□□ 0.74
SMAD9O15198 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.65■□□□□ 0.74
SMAD9O15198 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMAD9O15198 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SMAD9O15198 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.65■□□□□ 0.74
SMAD9O15198 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SMAD9O15198 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SMAD9O15198 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
SMAD9O15198 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.64■□□□□ 0.74
SMAD9O15198 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SMAD9O15198 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD9O15198 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD9O15198 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SMAD9O15198 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.64■□□□□ 0.73
SMAD9O15198 AC099791.1-201ENST00000416440 715 ntBASIC19.64■□□□□ 0.73
SMAD9O15198 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.64■□□□□ 0.73
SMAD9O15198 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SMAD9O15198 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.64■□□□□ 0.73
SMAD9O15198 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD9O15198 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD9O15198 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.64■□□□□ 0.73
SMAD9O15198 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.64■□□□□ 0.73
SMAD9O15198 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMAD9O15198 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.64■□□□□ 0.73
SMAD9O15198 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SMAD9O15198 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SMAD9O15198 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.63■□□□□ 0.73
SMAD9O15198 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.63■□□□□ 0.73
SMAD9O15198 AC091305.1-201ENST00000479476 895 ntBASIC19.63■□□□□ 0.73
SMAD9O15198 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.63■□□□□ 0.73
SMAD9O15198 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.63■□□□□ 0.73
SMAD9O15198 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMAD9O15198 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMAD9O15198 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.62■□□□□ 0.73
SMAD9O15198 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
SMAD9O15198 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SMAD9O15198 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SMAD9O15198 RASA4CP-201ENST00000424092 1398 ntBASIC19.62■□□□□ 0.73
SMAD9O15198 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMAD9O15198 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.62■□□□□ 0.73
SMAD9O15198 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
SMAD9O15198 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.62■□□□□ 0.73
SMAD9O15198 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMAD9O15198 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMAD9O15198 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.62■□□□□ 0.73
SMAD9O15198 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMAD9O15198 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMAD9O15198 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMAD9O15198 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SMAD9O15198 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
SMAD9O15198 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMAD9O15198 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.61■□□□□ 0.73
SMAD9O15198 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SMAD9O15198 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMAD9O15198 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMAD9O15198 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.61■□□□□ 0.73
SMAD9O15198 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.61■□□□□ 0.73
SMAD9O15198 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.61■□□□□ 0.73
SMAD9O15198 CA15P2-201ENST00000611168 834 ntBASIC19.61■□□□□ 0.73
SMAD9O15198 AL031602.1-201ENST00000633169 911 ntBASIC19.61■□□□□ 0.73
SMAD9O15198 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.61■□□□□ 0.73
SMAD9O15198 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMAD9O15198 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SMAD9O15198 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD9O15198 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SMAD9O15198 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
SMAD9O15198 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD9O15198 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD9O15198 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD9O15198 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD9O15198 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.6■□□□□ 0.73
SMAD9O15198 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.6■□□□□ 0.73
SMAD9O15198 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SMAD9O15198 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMAD9O15198 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms