Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC1O00299 RARRES2P1-201ENST00000474487 481 ntBASIC20.5■□□□□ 0.87
CLIC1O00299 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.5■□□□□ 0.87
CLIC1O00299 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CLIC1O00299 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC1O00299 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC1O00299 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
CLIC1O00299 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLIC1O00299 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.5■□□□□ 0.87
CLIC1O00299 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.5■□□□□ 0.87
CLIC1O00299 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CLIC1O00299 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC1O00299 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC1O00299 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.49■□□□□ 0.87
CLIC1O00299 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC1O00299 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC1O00299 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC1O00299 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC1O00299 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC1O00299 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC1O00299 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CLIC1O00299 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CLIC1O00299 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLIC1O00299 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC1O00299 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.48■□□□□ 0.87
CLIC1O00299 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.48■□□□□ 0.87
CLIC1O00299 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC1O00299 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC1O00299 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CLIC1O00299 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC1O00299 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC1O00299 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC1O00299 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC1O00299 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC1O00299 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
CLIC1O00299 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLIC1O00299 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CLIC1O00299 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLIC1O00299 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLIC1O00299 AC009299.2-201ENST00000482477 511 ntBASIC20.47■□□□□ 0.87
CLIC1O00299 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.47■□□□□ 0.87
CLIC1O00299 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLIC1O00299 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.47■□□□□ 0.87
CLIC1O00299 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CLIC1O00299 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLIC1O00299 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC1O00299 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC1O00299 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC1O00299 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.46■□□□□ 0.87
CLIC1O00299 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CLIC1O00299 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC1O00299 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC1O00299 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC1O00299 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC1O00299 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLIC1O00299 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.46■□□□□ 0.87
CLIC1O00299 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CLIC1O00299 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CLIC1O00299 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC1O00299 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC1O00299 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
CLIC1O00299 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC1O00299 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
CLIC1O00299 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC1O00299 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC1O00299 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.45■□□□□ 0.86
CLIC1O00299 AL117332.1-201ENST00000622628 974 ntBASIC20.45■□□□□ 0.86
CLIC1O00299 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC1O00299 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC1O00299 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLIC1O00299 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.44■□□□□ 0.86
CLIC1O00299 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CLIC1O00299 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.44■□□□□ 0.86
CLIC1O00299 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.44■□□□□ 0.86
CLIC1O00299 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CLIC1O00299 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 MIR6724-1-201ENST00000616420 92 ntBASIC20.44■□□□□ 0.86
CLIC1O00299 MIR6724-2-201ENST00000616483 92 ntBASIC20.44■□□□□ 0.86
CLIC1O00299 MIR6724-4-201ENST00000617390 92 ntBASIC20.44■□□□□ 0.86
CLIC1O00299 MIR6724-3-201ENST00000622482 92 ntBASIC20.44■□□□□ 0.86
CLIC1O00299 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CLIC1O00299 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.44■□□□□ 0.86
CLIC1O00299 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.44■□□□□ 0.86
CLIC1O00299 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.44■□□□□ 0.86
CLIC1O00299 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC1O00299 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms