Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC13.26□□□□□ -0.29
SLC1A1P43005 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 NMUR2-201ENST00000255262 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 ZNF583-201ENST00000291598 2538 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
SLC1A1P43005 RAD51C-201ENST00000337432 2591 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 STX16-202ENST00000355957 4897 ntTSL 2 BASIC13.26□□□□□ -0.29
SLC1A1P43005 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC13.26□□□□□ -0.29
SLC1A1P43005 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC13.26□□□□□ -0.29
SLC1A1P43005 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 OR10N1P-201ENST00000392758 869 ntBASIC13.26□□□□□ -0.29
SLC1A1P43005 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SLC1A1P43005 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC13.26□□□□□ -0.29
SLC1A1P43005 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 AL078621.2-201ENST00000419351 698 ntBASIC13.26□□□□□ -0.29
SLC1A1P43005 HNRNPA1P21-201ENST00000424115 961 ntBASIC13.26□□□□□ -0.29
SLC1A1P43005 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 AC105443.1-201ENST00000433754 712 ntBASIC13.26□□□□□ -0.29
SLC1A1P43005 SCLT1-202ENST00000439369 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC13.26□□□□□ -0.29
SLC1A1P43005 PIN4P1-201ENST00000451079 396 ntBASIC13.26□□□□□ -0.29
SLC1A1P43005 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13.26□□□□□ -0.29
SLC1A1P43005 IGHEP2-201ENST00000519308 1256 ntBASIC13.26□□□□□ -0.29
SLC1A1P43005 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC13.26□□□□□ -0.29
SLC1A1P43005 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC13.26□□□□□ -0.29
SLC1A1P43005 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.26□□□□□ -0.29
SLC1A1P43005 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
SLC1A1P43005 FAM226B-201ENST00000602508 1490 ntBASIC13.26□□□□□ -0.29
SLC1A1P43005 ZNF674-AS1-202ENST00000609887 672 ntTSL 5 BASIC13.26□□□□□ -0.29
SLC1A1P43005 OR4C3-202ENST00000611380 597 ntBASIC13.26□□□□□ -0.29
SLC1A1P43005 AC010531.8-201ENST00000623341 685 ntBASIC13.26□□□□□ -0.29
SLC1A1P43005 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC13.26□□□□□ -0.29
SLC1A1P43005 AC018645.3-201ENST00000628855 2646 ntBASIC13.26□□□□□ -0.29
SLC1A1P43005 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SLC1A1P43005 BX005132.1-201ENST00000641403 1580 ntBASIC13.26□□□□□ -0.29
SLC1A1P43005 ETV5-201ENST00000306376 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 LINC01429-201ENST00000438154 2326 ntTSL 2 BASIC13.25□□□□□ -0.29
SLC1A1P43005 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 WAC-204ENST00000375646 2176 ntTSL 5 BASIC13.25□□□□□ -0.29
SLC1A1P43005 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 CEP70-208ENST00000474781 2028 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SLC1A1P43005 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC13.25□□□□□ -0.29
SLC1A1P43005 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.25□□□□□ -0.29
SLC1A1P43005 AL596223.1-201ENST00000450995 1933 ntTSL 2 BASIC13.25□□□□□ -0.29
SLC1A1P43005 LINC01898-201ENST00000564156 1903 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 C1orf198-203ENST00000470540 3819 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SLC1A1P43005 LILRB4-202ENST00000391733 1742 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SLC1A1P43005 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 NDUFA5-211ENST00000611607 1504 ntTSL 2 BASIC13.25□□□□□ -0.29
SLC1A1P43005 ZNF132-201ENST00000254166 3031 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC13.25□□□□□ -0.29
SLC1A1P43005 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC13.25□□□□□ -0.29
SLC1A1P43005 PPP6C-202ENST00000415905 4172 ntTSL 2 BASIC13.25□□□□□ -0.29
SLC1A1P43005 CA6-203ENST00000377443 1319 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 GH1-203ENST00000351388 685 ntTSL 2 BASIC13.25□□□□□ -0.29
SLC1A1P43005 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 BNIP1-203ENST00000352523 1143 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SLC1A1P43005 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 MIR1301-201ENST00000408518 82 ntBASIC13.25□□□□□ -0.29
SLC1A1P43005 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SLC1A1P43005 AQP7P5-201ENST00000428759 1049 ntBASIC13.25□□□□□ -0.29
SLC1A1P43005 KRTAP9-10P-201ENST00000435672 207 ntBASIC13.25□□□□□ -0.29
SLC1A1P43005 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC13.25□□□□□ -0.29
SLC1A1P43005 RBM14-205ENST00000443702 732 ntTSL 3 BASIC13.25□□□□□ -0.29
SLC1A1P43005 AQP7P4-201ENST00000447083 1042 ntBASIC13.25□□□□□ -0.29
SLC1A1P43005 VENTXP4-201ENST00000449029 958 ntBASIC13.25□□□□□ -0.29
SLC1A1P43005 AC025594.1-201ENST00000469533 543 ntBASIC13.25□□□□□ -0.29
SLC1A1P43005 AC104784.1-201ENST00000473096 294 ntBASIC13.25□□□□□ -0.29
SLC1A1P43005 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.25□□□□□ -0.29
SLC1A1P43005 SSSCA1-203ENST00000526877 713 ntTSL 3 BASIC13.25□□□□□ -0.29
SLC1A1P43005 MYL6-210ENST00000548400 573 ntTSL 3 BASIC13.25□□□□□ -0.29
SLC1A1P43005 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC13.25□□□□□ -0.29
SLC1A1P43005 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC13.25□□□□□ -0.29
SLC1A1P43005 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC13.25□□□□□ -0.29
SLC1A1P43005 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC13.25□□□□□ -0.29
SLC1A1P43005 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 AQP7P3-201ENST00000624547 1041 ntBASIC13.25□□□□□ -0.29
SLC1A1P43005 BX322534.1-201ENST00000635574 241 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms