Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm12728V9GX31 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Gm12728V9GX31 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.51■□□□□ 0.07
Gm12728V9GX31 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12728V9GX31 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12728V9GX31 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.51■□□□□ 0.07
Gm12728V9GX31 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12728V9GX31 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12728V9GX31 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Gm12728V9GX31 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.5■□□□□ 0.07
Gm12728V9GX31 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12728V9GX31 Gm43530-201ENSMUST00000195920 274 ntBASIC15.5■□□□□ 0.07
Gm12728V9GX31 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.5■□□□□ 0.07
Gm12728V9GX31 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12728V9GX31 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12728V9GX31 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12728V9GX31 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12728V9GX31 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12728V9GX31 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12728V9GX31 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gm12728V9GX31 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC15.49■□□□□ 0.07
Gm12728V9GX31 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gm12728V9GX31 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Gm12728V9GX31 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm12728V9GX31 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gm12728V9GX31 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Gm12728V9GX31 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm12728V9GX31 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gm12728V9GX31 Etf1-202ENSMUST00000180351 108 ntBASIC15.47■□□□□ 0.07
Gm12728V9GX31 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC15.47■□□□□ 0.07
Gm12728V9GX31 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Gm12728V9GX31 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Gm12728V9GX31 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gm12728V9GX31 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm12728V9GX31 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm12728V9GX31 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Gm12728V9GX31 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm12728V9GX31 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
Gm12728V9GX31 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Gm12728V9GX31 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm12728V9GX31 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Gm12728V9GX31 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm12728V9GX31 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm12728V9GX31 Gm10657-201ENSMUST00000193528 1031 ntBASIC15.46■□□□□ 0.07
Gm12728V9GX31 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm12728V9GX31 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Gm12728V9GX31 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gm12728V9GX31 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
Gm12728V9GX31 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Gm12728V9GX31 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Gm12728V9GX31 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm12728V9GX31 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gm12728V9GX31 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms