Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.64■■□□□ 1.7
SNCAIPQ9Y6H5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.64■■□□□ 1.7
SNCAIPQ9Y6H5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SNCAIPQ9Y6H5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SNCAIPQ9Y6H5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.63■■□□□ 1.69
SNCAIPQ9Y6H5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNCAIPQ9Y6H5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNCAIPQ9Y6H5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SNCAIPQ9Y6H5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNCAIPQ9Y6H5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNCAIPQ9Y6H5 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC25.63■■□□□ 1.69
SNCAIPQ9Y6H5 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNCAIPQ9Y6H5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC25.63■■□□□ 1.69
SNCAIPQ9Y6H5 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNCAIPQ9Y6H5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.63■■□□□ 1.69
SNCAIPQ9Y6H5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNCAIPQ9Y6H5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SNCAIPQ9Y6H5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SNCAIPQ9Y6H5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.63■■□□□ 1.69
SNCAIPQ9Y6H5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNCAIPQ9Y6H5 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.62■■□□□ 1.69
SNCAIPQ9Y6H5 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
SNCAIPQ9Y6H5 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
SNCAIPQ9Y6H5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
SNCAIPQ9Y6H5 APTR-205ENST00000447009 902 ntTSL 2 BASIC25.62■■□□□ 1.69
SNCAIPQ9Y6H5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC25.62■■□□□ 1.69
SNCAIPQ9Y6H5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.62■■□□□ 1.69
SNCAIPQ9Y6H5 AC104187.1-201ENST00000607510 612 ntBASIC25.62■■□□□ 1.69
SNCAIPQ9Y6H5 TMEM191A-211ENST00000637163 1067 ntBASIC25.62■■□□□ 1.69
SNCAIPQ9Y6H5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.62■■□□□ 1.69
SNCAIPQ9Y6H5 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
SNCAIPQ9Y6H5 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.61■■□□□ 1.69
SNCAIPQ9Y6H5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNCAIPQ9Y6H5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SNCAIPQ9Y6H5 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
SNCAIPQ9Y6H5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SNCAIPQ9Y6H5 CD99P1-205ENST00000527459 561 ntBASIC25.61■■□□□ 1.69
SNCAIPQ9Y6H5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SNCAIPQ9Y6H5 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.61■■□□□ 1.69
SNCAIPQ9Y6H5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SNCAIPQ9Y6H5 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNCAIPQ9Y6H5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
SNCAIPQ9Y6H5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
SNCAIPQ9Y6H5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.6■■□□□ 1.69
SNCAIPQ9Y6H5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNCAIPQ9Y6H5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC25.6■■□□□ 1.69
SNCAIPQ9Y6H5 AL121832.2-201ENST00000610979 668 ntBASIC25.6■■□□□ 1.69
SNCAIPQ9Y6H5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SNCAIPQ9Y6H5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNCAIPQ9Y6H5 AC005224.4-201ENST00000583262 1652 ntBASIC25.6■■□□□ 1.69
SNCAIPQ9Y6H5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SNCAIPQ9Y6H5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
SNCAIPQ9Y6H5 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SNCAIPQ9Y6H5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SNCAIPQ9Y6H5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SNCAIPQ9Y6H5 GUSBP6-202ENST00000438529 1198 ntBASIC25.59■■□□□ 1.69
SNCAIPQ9Y6H5 DUX4L16-201ENST00000555130 1264 ntBASIC25.59■■□□□ 1.69
SNCAIPQ9Y6H5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.59■■□□□ 1.69
SNCAIPQ9Y6H5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SNCAIPQ9Y6H5 H19-210ENST00000439725 1929 ntTSL 2 BASIC25.59■■□□□ 1.69
SNCAIPQ9Y6H5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
SNCAIPQ9Y6H5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.58■■□□□ 1.69
SNCAIPQ9Y6H5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.58■■□□□ 1.69
SNCAIPQ9Y6H5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.58■■□□□ 1.69
SNCAIPQ9Y6H5 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.58■■□□□ 1.69
SNCAIPQ9Y6H5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
SNCAIPQ9Y6H5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SNCAIPQ9Y6H5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
SNCAIPQ9Y6H5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC25.58■■□□□ 1.69
SNCAIPQ9Y6H5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SNCAIPQ9Y6H5 TSPY6P-201ENST00000448518 926 ntBASIC25.58■■□□□ 1.69
SNCAIPQ9Y6H5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SNCAIPQ9Y6H5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SNCAIPQ9Y6H5 KRT87P-202ENST00000534226 1464 ntBASIC25.58■■□□□ 1.69
SNCAIPQ9Y6H5 LINC00543-201ENST00000567234 1845 ntBASIC25.58■■□□□ 1.68
SNCAIPQ9Y6H5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.58■■□□□ 1.68
SNCAIPQ9Y6H5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.68
SNCAIPQ9Y6H5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC25.57■■□□□ 1.68
SNCAIPQ9Y6H5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
SNCAIPQ9Y6H5 AC083906.2-201ENST00000511578 360 ntBASIC25.57■■□□□ 1.68
SNCAIPQ9Y6H5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC25.57■■□□□ 1.68
SNCAIPQ9Y6H5 SLC7A5P2-201ENST00000553010 536 ntBASIC25.57■■□□□ 1.68
SNCAIPQ9Y6H5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SNCAIPQ9Y6H5 AC004812.2-201ENST00000611079 2094 ntBASIC25.57■■□□□ 1.68
SNCAIPQ9Y6H5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC25.57■■□□□ 1.68
SNCAIPQ9Y6H5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SNCAIPQ9Y6H5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SNCAIPQ9Y6H5 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SNCAIPQ9Y6H5 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
SNCAIPQ9Y6H5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
SNCAIPQ9Y6H5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.56■■□□□ 1.68
SNCAIPQ9Y6H5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.56■■□□□ 1.68
SNCAIPQ9Y6H5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
SNCAIPQ9Y6H5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.55■■□□□ 1.68
SNCAIPQ9Y6H5 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
SNCAIPQ9Y6H5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
SNCAIPQ9Y6H5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
SNCAIPQ9Y6H5 TSPY20P-201ENST00000450910 630 ntBASIC25.55■■□□□ 1.68
SNCAIPQ9Y6H5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC25.55■■□□□ 1.68
SNCAIPQ9Y6H5 UBE2DNL-204ENST00000602536 740 ntBASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms