Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PCDHA7Q9UN72 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
PCDHA7Q9UN72 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 KRT16P3-201ENST00000439127 1283 ntBASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 AL035685.1-201ENST00000636663 812 ntBASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PCDHA7Q9UN72 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PCDHA7Q9UN72 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
PCDHA7Q9UN72 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA7Q9UN72 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA7Q9UN72 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA7Q9UN72 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA7Q9UN72 AC006455.2-201ENST00000429931 906 ntBASIC24.82■■□□□ 1.56
PCDHA7Q9UN72 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA7Q9UN72 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC24.82■■□□□ 1.56
PCDHA7Q9UN72 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA7Q9UN72 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PCDHA7Q9UN72 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA7Q9UN72 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA7Q9UN72 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA7Q9UN72 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHA7Q9UN72 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHA7Q9UN72 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA7Q9UN72 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PCDHA7Q9UN72 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.81■■□□□ 1.56
PCDHA7Q9UN72 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.81■■□□□ 1.56
PCDHA7Q9UN72 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 AC241377.3-202ENST00000626088 1088 ntBASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 AC241585.3-202ENST00000628937 1088 ntBASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 AC245100.8-202ENST00000629247 1058 ntBASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 FAM99A-202ENST00000538190 1989 ntBASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC24.8■■□□□ 1.56
PCDHA7Q9UN72 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PCDHA7Q9UN72 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA7Q9UN72 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
PCDHA7Q9UN72 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA7Q9UN72 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHA7Q9UN72 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA7Q9UN72 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC24.78■■□□□ 1.56
PCDHA7Q9UN72 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC24.78■■□□□ 1.56
PCDHA7Q9UN72 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA7Q9UN72 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PCDHA7Q9UN72 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.78■■□□□ 1.56
PCDHA7Q9UN72 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA7Q9UN72 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA7Q9UN72 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.77■■□□□ 1.56
PCDHA7Q9UN72 GUSBP5-201ENST00000418136 578 ntBASIC24.77■■□□□ 1.56
PCDHA7Q9UN72 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.77■■□□□ 1.56
PCDHA7Q9UN72 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.77■■□□□ 1.56
PCDHA7Q9UN72 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA7Q9UN72 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.77■■□□□ 1.56
PCDHA7Q9UN72 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA7Q9UN72 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA7Q9UN72 AC026310.3-201ENST00000625186 2373 ntBASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 AC133637.1-201ENST00000624115 1537 ntBASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA7Q9UN72 pRNA.6-201ENST00000610482 90 ntBASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms