Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 AL031848.2-201ENST00000607670 837 ntBASIC20.79■□□□□ 0.92
NIPSNAP3AQ9UFN0 MIR6722-201ENST00000617286 78 ntBASIC20.79■□□□□ 0.92
NIPSNAP3AQ9UFN0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.79■□□□□ 0.92
NIPSNAP3AQ9UFN0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NIPSNAP3AQ9UFN0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NIPSNAP3AQ9UFN0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NIPSNAP3AQ9UFN0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NIPSNAP3AQ9UFN0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.78■□□□□ 0.92
NIPSNAP3AQ9UFN0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NIPSNAP3AQ9UFN0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.78■□□□□ 0.92
NIPSNAP3AQ9UFN0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
NIPSNAP3AQ9UFN0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NIPSNAP3AQ9UFN0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.78■□□□□ 0.92
NIPSNAP3AQ9UFN0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
NIPSNAP3AQ9UFN0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NIPSNAP3AQ9UFN0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NIPSNAP3AQ9UFN0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NIPSNAP3AQ9UFN0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.78■□□□□ 0.92
NIPSNAP3AQ9UFN0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.78■□□□□ 0.92
NIPSNAP3AQ9UFN0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.78■□□□□ 0.92
NIPSNAP3AQ9UFN0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NIPSNAP3AQ9UFN0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NIPSNAP3AQ9UFN0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.77■□□□□ 0.92
NIPSNAP3AQ9UFN0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.77■□□□□ 0.92
NIPSNAP3AQ9UFN0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NIPSNAP3AQ9UFN0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NIPSNAP3AQ9UFN0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NIPSNAP3AQ9UFN0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
NIPSNAP3AQ9UFN0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NIPSNAP3AQ9UFN0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NIPSNAP3AQ9UFN0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
NIPSNAP3AQ9UFN0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NIPSNAP3AQ9UFN0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NIPSNAP3AQ9UFN0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.76■□□□□ 0.91
NIPSNAP3AQ9UFN0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NIPSNAP3AQ9UFN0 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NIPSNAP3AQ9UFN0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NIPSNAP3AQ9UFN0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NIPSNAP3AQ9UFN0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NIPSNAP3AQ9UFN0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NIPSNAP3AQ9UFN0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NIPSNAP3AQ9UFN0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NIPSNAP3AQ9UFN0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.76■□□□□ 0.91
NIPSNAP3AQ9UFN0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.76■□□□□ 0.91
NIPSNAP3AQ9UFN0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NIPSNAP3AQ9UFN0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NIPSNAP3AQ9UFN0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NIPSNAP3AQ9UFN0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.75■□□□□ 0.91
NIPSNAP3AQ9UFN0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NIPSNAP3AQ9UFN0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.75■□□□□ 0.91
NIPSNAP3AQ9UFN0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NIPSNAP3AQ9UFN0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.75■□□□□ 0.91
NIPSNAP3AQ9UFN0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.75■□□□□ 0.91
NIPSNAP3AQ9UFN0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.75■□□□□ 0.91
NIPSNAP3AQ9UFN0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NIPSNAP3AQ9UFN0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.75■□□□□ 0.91
NIPSNAP3AQ9UFN0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NIPSNAP3AQ9UFN0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NIPSNAP3AQ9UFN0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPSNAP3AQ9UFN0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.74■□□□□ 0.91
NIPSNAP3AQ9UFN0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPSNAP3AQ9UFN0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NIPSNAP3AQ9UFN0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPSNAP3AQ9UFN0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
NIPSNAP3AQ9UFN0 DUX4L4-201ENST00000566884 1269 ntBASIC20.74■□□□□ 0.91
NIPSNAP3AQ9UFN0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPSNAP3AQ9UFN0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NIPSNAP3AQ9UFN0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NIPSNAP3AQ9UFN0 FAM99A-202ENST00000538190 1989 ntBASIC20.74■□□□□ 0.91
NIPSNAP3AQ9UFN0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.74■□□□□ 0.91
NIPSNAP3AQ9UFN0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 AC010542.4-201ENST00000563151 1910 ntBASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NIPSNAP3AQ9UFN0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 AC004687.1-201ENST00000579003 1625 ntBASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.72■□□□□ 0.91
NIPSNAP3AQ9UFN0 BX664725.1-201ENST00000438252 379 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms