Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 CA15P2-201ENST00000611168 834 ntBASIC20.68■□□□□ 0.9
KCMF1Q9P0J7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KCMF1Q9P0J7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KCMF1Q9P0J7 AC068587.7-201ENST00000641602 218 ntBASIC20.68■□□□□ 0.9
KCMF1Q9P0J7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KCMF1Q9P0J7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KCMF1Q9P0J7 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 AP001330.3-201ENST00000520123 633 ntBASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 AP005435.1-201ENST00000529293 1178 ntBASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 AL136967.2-201ENST00000623968 743 ntBASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 AC127496.7-201ENST00000625110 1798 ntBASIC20.67■□□□□ 0.9
KCMF1Q9P0J7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 AC233723.2-201ENST00000623798 2106 ntBASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 AC142381.2-201ENST00000566120 298 ntBASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 AC008764.7-201ENST00000593779 1081 ntBASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
KCMF1Q9P0J7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.65■□□□□ 0.9
KCMF1Q9P0J7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCMF1Q9P0J7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCMF1Q9P0J7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
KCMF1Q9P0J7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
KCMF1Q9P0J7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.65■□□□□ 0.9
KCMF1Q9P0J7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
KCMF1Q9P0J7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
KCMF1Q9P0J7 MIR939-201ENST00000401314 82 ntBASIC20.65■□□□□ 0.9
KCMF1Q9P0J7 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.65■□□□□ 0.9
KCMF1Q9P0J7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
KCMF1Q9P0J7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
KCMF1Q9P0J7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KCMF1Q9P0J7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCMF1Q9P0J7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.64■□□□□ 0.89
KCMF1Q9P0J7 AF213884.3-201ENST00000563833 479 ntBASIC20.64■□□□□ 0.89
KCMF1Q9P0J7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCMF1Q9P0J7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
KCMF1Q9P0J7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.64■□□□□ 0.89
KCMF1Q9P0J7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 AC137767.1-201ENST00000602918 1920 ntBASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 AC079834.2-201ENST00000609776 1949 ntBASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 AC099791.1-201ENST00000416440 715 ntBASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 AC027682.1-201ENST00000562846 899 ntBASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
KCMF1Q9P0J7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.62■□□□□ 0.89
KCMF1Q9P0J7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KCMF1Q9P0J7 RASA4CP-201ENST00000424092 1398 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms