Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEC61A2Q9H9S3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SEC61A2Q9H9S3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SEC61A2Q9H9S3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEC61A2Q9H9S3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEC61A2Q9H9S3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEC61A2Q9H9S3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEC61A2Q9H9S3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEC61A2Q9H9S3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEC61A2Q9H9S3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SEC61A2Q9H9S3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A2Q9H9S3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.49■□□□□ 0.71
SEC61A2Q9H9S3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
SEC61A2Q9H9S3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A2Q9H9S3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A2Q9H9S3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SEC61A2Q9H9S3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A2Q9H9S3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A2Q9H9S3 UNC93B3-201ENST00000308076 687 ntBASIC19.49■□□□□ 0.71
SEC61A2Q9H9S3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SEC61A2Q9H9S3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A2Q9H9S3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.49■□□□□ 0.71
SEC61A2Q9H9S3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A2Q9H9S3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A2Q9H9S3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A2Q9H9S3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEC61A2Q9H9S3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEC61A2Q9H9S3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEC61A2Q9H9S3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SEC61A2Q9H9S3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEC61A2Q9H9S3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SEC61A2Q9H9S3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SEC61A2Q9H9S3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEC61A2Q9H9S3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEC61A2Q9H9S3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEC61A2Q9H9S3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SEC61A2Q9H9S3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEC61A2Q9H9S3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEC61A2Q9H9S3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SEC61A2Q9H9S3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEC61A2Q9H9S3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.47■□□□□ 0.71
SEC61A2Q9H9S3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.47■□□□□ 0.71
SEC61A2Q9H9S3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SEC61A2Q9H9S3 AL139246.5-201ENST00000606645 996 ntBASIC19.47■□□□□ 0.71
SEC61A2Q9H9S3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.47■□□□□ 0.71
SEC61A2Q9H9S3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEC61A2Q9H9S3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEC61A2Q9H9S3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 SERBP1P1-201ENST00000396021 1160 ntBASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 EP400NL-214ENST00000641289 2402 ntBASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.46■□□□□ 0.71
SEC61A2Q9H9S3 LINC01960-201ENST00000563759 1884 ntBASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 AL136162.1-201ENST00000607711 1078 ntBASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 pRNA.6-201ENST00000610482 90 ntBASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 pRNA.5-201ENST00000612139 90 ntBASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 pRNA.11-201ENST00000618423 90 ntBASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 pRNA.13-201ENST00000619112 90 ntBASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.45■□□□□ 0.7
SEC61A2Q9H9S3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 AC024257.2-201ENST00000549699 147 ntBASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 AL499627.2-201ENST00000606283 725 ntBASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
SEC61A2Q9H9S3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms