Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldnd1Q9CQX5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldnd1Q9CQX5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldnd1Q9CQX5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cldnd1Q9CQX5 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldnd1Q9CQX5 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cldnd1Q9CQX5 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
Cldnd1Q9CQX5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Cldnd1Q9CQX5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldnd1Q9CQX5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldnd1Q9CQX5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Cldnd1Q9CQX5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cldnd1Q9CQX5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldnd1Q9CQX5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Cldnd1Q9CQX5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cldnd1Q9CQX5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Cldnd1Q9CQX5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldnd1Q9CQX5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cldnd1Q9CQX5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cldnd1Q9CQX5 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
Cldnd1Q9CQX5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Cldnd1Q9CQX5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldnd1Q9CQX5 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Cldnd1Q9CQX5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Cldnd1Q9CQX5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
Cldnd1Q9CQX5 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cldnd1Q9CQX5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldnd1Q9CQX5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cldnd1Q9CQX5 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldnd1Q9CQX5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Cldnd1Q9CQX5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cldnd1Q9CQX5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldnd1Q9CQX5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldnd1Q9CQX5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Cldnd1Q9CQX5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldnd1Q9CQX5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.95■□□□□ 0.78
Cldnd1Q9CQX5 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldnd1Q9CQX5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.95■□□□□ 0.78
Cldnd1Q9CQX5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldnd1Q9CQX5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cldnd1Q9CQX5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cldnd1Q9CQX5 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cldnd1Q9CQX5 Gm5643-201ENSMUST00000117081 966 ntBASIC19.94■□□□□ 0.78
Cldnd1Q9CQX5 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC19.94■□□□□ 0.78
Cldnd1Q9CQX5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC19.94■□□□□ 0.78
Cldnd1Q9CQX5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cldnd1Q9CQX5 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cldnd1Q9CQX5 AA386476-201ENSMUST00000098781 1665 ntBASIC19.94■□□□□ 0.78
Cldnd1Q9CQX5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.93■□□□□ 0.78
Cldnd1Q9CQX5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.93■□□□□ 0.78
Cldnd1Q9CQX5 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.93■□□□□ 0.78
Cldnd1Q9CQX5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldnd1Q9CQX5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldnd1Q9CQX5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.93■□□□□ 0.78
Cldnd1Q9CQX5 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldnd1Q9CQX5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cldnd1Q9CQX5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cldnd1Q9CQX5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cldnd1Q9CQX5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cldnd1Q9CQX5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldnd1Q9CQX5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cldnd1Q9CQX5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.92■□□□□ 0.78
Cldnd1Q9CQX5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cldnd1Q9CQX5 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.92■□□□□ 0.78
Cldnd1Q9CQX5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.92■□□□□ 0.78
Cldnd1Q9CQX5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldnd1Q9CQX5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cldnd1Q9CQX5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
Cldnd1Q9CQX5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cldnd1Q9CQX5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.91■□□□□ 0.78
Cldnd1Q9CQX5 Gm29994-201ENSMUST00000195495 1193 ntBASIC19.91■□□□□ 0.78
Cldnd1Q9CQX5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Cldnd1Q9CQX5 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.91■□□□□ 0.78
Cldnd1Q9CQX5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cldnd1Q9CQX5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cldnd1Q9CQX5 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldnd1Q9CQX5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cldnd1Q9CQX5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.9■□□□□ 0.78
Cldnd1Q9CQX5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldnd1Q9CQX5 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cldnd1Q9CQX5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldnd1Q9CQX5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldnd1Q9CQX5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldnd1Q9CQX5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cldnd1Q9CQX5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cldnd1Q9CQX5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.78
Cldnd1Q9CQX5 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldnd1Q9CQX5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldnd1Q9CQX5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldnd1Q9CQX5 Gm7860-201ENSMUST00000121190 879 ntBASIC19.89■□□□□ 0.77
Cldnd1Q9CQX5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cldnd1Q9CQX5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldnd1Q9CQX5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cldnd1Q9CQX5 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cldnd1Q9CQX5 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldnd1Q9CQX5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cldnd1Q9CQX5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cldnd1Q9CQX5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldnd1Q9CQX5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cldnd1Q9CQX5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 113.5 ms