Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MFSD11-216ENST00000590393 1141 ntBASIC26.84■■□□□ 1.89
RTFDC1Q9BY42 WT1-AS_3.1-201ENST00000613262 234 ntBASIC26.84■■□□□ 1.89
RTFDC1Q9BY42 GAMT-205ENST00000640762 751 ntTSL 5 BASIC26.84■■□□□ 1.89
RTFDC1Q9BY42 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.84■■□□□ 1.89
RTFDC1Q9BY42 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
RTFDC1Q9BY42 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.84■■□□□ 1.89
RTFDC1Q9BY42 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RTFDC1Q9BY42 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RTFDC1Q9BY42 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC26.83■■□□□ 1.89
RTFDC1Q9BY42 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
RTFDC1Q9BY42 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
RTFDC1Q9BY42 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC26.83■■□□□ 1.89
RTFDC1Q9BY42 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.83■■□□□ 1.89
RTFDC1Q9BY42 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.83■■□□□ 1.88
RTFDC1Q9BY42 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
RTFDC1Q9BY42 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.82■■□□□ 1.88
RTFDC1Q9BY42 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC26.82■■□□□ 1.88
RTFDC1Q9BY42 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
RTFDC1Q9BY42 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC26.82■■□□□ 1.88
RTFDC1Q9BY42 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.82■■□□□ 1.88
RTFDC1Q9BY42 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC26.82■■□□□ 1.88
RTFDC1Q9BY42 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC26.82■■□□□ 1.88
RTFDC1Q9BY42 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
RTFDC1Q9BY42 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
RTFDC1Q9BY42 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
RTFDC1Q9BY42 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.81■■□□□ 1.88
RTFDC1Q9BY42 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
RTFDC1Q9BY42 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC26.81■■□□□ 1.88
RTFDC1Q9BY42 AL050303.2-201ENST00000619798 666 ntBASIC26.81■■□□□ 1.88
RTFDC1Q9BY42 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
RTFDC1Q9BY42 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.8■■□□□ 1.88
RTFDC1Q9BY42 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
RTFDC1Q9BY42 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RTFDC1Q9BY42 ASL-203ENST00000380839 1765 ntTSL 5 BASIC26.8■■□□□ 1.88
RTFDC1Q9BY42 TMEM191A-211ENST00000637163 1067 ntBASIC26.8■■□□□ 1.88
RTFDC1Q9BY42 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RTFDC1Q9BY42 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
RTFDC1Q9BY42 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.79■■□□□ 1.88
RTFDC1Q9BY42 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RTFDC1Q9BY42 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
RTFDC1Q9BY42 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.79■■□□□ 1.88
RTFDC1Q9BY42 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.79■■□□□ 1.88
RTFDC1Q9BY42 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RTFDC1Q9BY42 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.79■■□□□ 1.88
RTFDC1Q9BY42 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.79■■□□□ 1.88
RTFDC1Q9BY42 AL353803.4-201ENST00000565882 1934 ntBASIC26.78■■□□□ 1.88
RTFDC1Q9BY42 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
RTFDC1Q9BY42 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC26.78■■□□□ 1.88
RTFDC1Q9BY42 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC26.78■■□□□ 1.88
RTFDC1Q9BY42 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC26.78■■□□□ 1.88
RTFDC1Q9BY42 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
RTFDC1Q9BY42 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RTFDC1Q9BY42 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC26.78■■□□□ 1.88
RTFDC1Q9BY42 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RTFDC1Q9BY42 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
RTFDC1Q9BY42 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RTFDC1Q9BY42 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTFDC1Q9BY42 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RTFDC1Q9BY42 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTFDC1Q9BY42 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RTFDC1Q9BY42 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTFDC1Q9BY42 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTFDC1Q9BY42 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.77■■□□□ 1.88
RTFDC1Q9BY42 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RTFDC1Q9BY42 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC26.77■■□□□ 1.88
RTFDC1Q9BY42 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC26.77■■□□□ 1.88
RTFDC1Q9BY42 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RTFDC1Q9BY42 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
RTFDC1Q9BY42 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
RTFDC1Q9BY42 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.76■■□□□ 1.87
RTFDC1Q9BY42 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
RTFDC1Q9BY42 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RTFDC1Q9BY42 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
RTFDC1Q9BY42 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RTFDC1Q9BY42 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
RTFDC1Q9BY42 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.76■■□□□ 1.87
RTFDC1Q9BY42 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC26.76■■□□□ 1.87
RTFDC1Q9BY42 AL121832.2-201ENST00000610979 668 ntBASIC26.76■■□□□ 1.87
RTFDC1Q9BY42 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RTFDC1Q9BY42 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
RTFDC1Q9BY42 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC26.75■■□□□ 1.87
RTFDC1Q9BY42 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
RTFDC1Q9BY42 GUSBP6-202ENST00000438529 1198 ntBASIC26.75■■□□□ 1.87
RTFDC1Q9BY42 CD99P1-205ENST00000527459 561 ntBASIC26.75■■□□□ 1.87
RTFDC1Q9BY42 DUX4L16-201ENST00000555130 1264 ntBASIC26.75■■□□□ 1.87
RTFDC1Q9BY42 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC26.75■■□□□ 1.87
RTFDC1Q9BY42 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC26.75■■□□□ 1.87
RTFDC1Q9BY42 AC005224.4-201ENST00000583262 1652 ntBASIC26.75■■□□□ 1.87
RTFDC1Q9BY42 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RTFDC1Q9BY42 TSPY6P-201ENST00000448518 926 ntBASIC26.74■■□□□ 1.87
RTFDC1Q9BY42 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.74■■□□□ 1.87
RTFDC1Q9BY42 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC26.74■■□□□ 1.87
RTFDC1Q9BY42 AC104187.1-201ENST00000607510 612 ntBASIC26.74■■□□□ 1.87
RTFDC1Q9BY42 MAZ-216ENST00000616501 991 ntTSL 5 BASIC26.74■■□□□ 1.87
RTFDC1Q9BY42 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.74■■□□□ 1.87
RTFDC1Q9BY42 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTFDC1Q9BY42 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RTFDC1Q9BY42 AC083906.2-201ENST00000511578 360 ntBASIC26.73■■□□□ 1.87
RTFDC1Q9BY42 SLC7A5P2-201ENST00000553010 536 ntBASIC26.73■■□□□ 1.87
RTFDC1Q9BY42 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms