Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.79■■□□□ 1.08
LYSMD1Q96S90 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD1Q96S90 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.79■■□□□ 1.08
LYSMD1Q96S90 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD1Q96S90 ZNRF2P3-201ENST00000424200 374 ntBASIC21.79■■□□□ 1.08
LYSMD1Q96S90 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD1Q96S90 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD1Q96S90 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD1Q96S90 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD1Q96S90 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD1Q96S90 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.78■■□□□ 1.08
LYSMD1Q96S90 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.78■■□□□ 1.08
LYSMD1Q96S90 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD1Q96S90 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD1Q96S90 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD1Q96S90 IRS3P-201ENST00000223076 1006 ntBASIC21.78■■□□□ 1.08
LYSMD1Q96S90 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.78■■□□□ 1.08
LYSMD1Q96S90 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD1Q96S90 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD1Q96S90 AC012676.1-201ENST00000574705 1949 ntBASIC21.78■■□□□ 1.08
LYSMD1Q96S90 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD1Q96S90 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD1Q96S90 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD1Q96S90 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LYSMD1Q96S90 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD1Q96S90 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.77■■□□□ 1.08
LYSMD1Q96S90 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD1Q96S90 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
LYSMD1Q96S90 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.77■■□□□ 1.08
LYSMD1Q96S90 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
LYSMD1Q96S90 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
LYSMD1Q96S90 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.77■■□□□ 1.08
LYSMD1Q96S90 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD1Q96S90 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD1Q96S90 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD1Q96S90 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
LYSMD1Q96S90 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
LYSMD1Q96S90 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
LYSMD1Q96S90 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LYSMD1Q96S90 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD1Q96S90 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD1Q96S90 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.76■■□□□ 1.07
LYSMD1Q96S90 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.76■■□□□ 1.07
LYSMD1Q96S90 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD1Q96S90 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD1Q96S90 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD1Q96S90 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.76■■□□□ 1.07
LYSMD1Q96S90 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD1Q96S90 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD1Q96S90 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD1Q96S90 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD1Q96S90 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD1Q96S90 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
LYSMD1Q96S90 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.75■■□□□ 1.07
LYSMD1Q96S90 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.75■■□□□ 1.07
LYSMD1Q96S90 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD1Q96S90 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.75■■□□□ 1.07
LYSMD1Q96S90 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
LYSMD1Q96S90 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LYSMD1Q96S90 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD1Q96S90 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.75■■□□□ 1.07
LYSMD1Q96S90 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD1Q96S90 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
LYSMD1Q96S90 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD1Q96S90 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
LYSMD1Q96S90 LINC00526-201ENST00000581067 1875 ntBASIC21.73■■□□□ 1.07
LYSMD1Q96S90 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.73■■□□□ 1.07
LYSMD1Q96S90 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD1Q96S90 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD1Q96S90 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.73■■□□□ 1.07
LYSMD1Q96S90 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.73■■□□□ 1.07
LYSMD1Q96S90 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.73■■□□□ 1.07
LYSMD1Q96S90 AC012414.1-201ENST00000556676 535 ntBASIC21.73■■□□□ 1.07
LYSMD1Q96S90 SMUG1P1-201ENST00000590640 811 ntBASIC21.73■■□□□ 1.07
LYSMD1Q96S90 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.73■■□□□ 1.07
LYSMD1Q96S90 AL358852.1-201ENST00000623174 1268 ntBASIC21.73■■□□□ 1.07
LYSMD1Q96S90 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD1Q96S90 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
LYSMD1Q96S90 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD1Q96S90 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
LYSMD1Q96S90 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.72■■□□□ 1.07
LYSMD1Q96S90 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD1Q96S90 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD1Q96S90 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD1Q96S90 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms