Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.57■■□□□ 1.2
PRICKLE1Q96MT3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PRICKLE1Q96MT3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PRICKLE1Q96MT3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.57■■□□□ 1.2
PRICKLE1Q96MT3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.56■■□□□ 1.2
PRICKLE1Q96MT3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.56■■□□□ 1.2
PRICKLE1Q96MT3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PRICKLE1Q96MT3 AC012414.1-201ENST00000556676 535 ntBASIC22.56■■□□□ 1.2
PRICKLE1Q96MT3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PRICKLE1Q96MT3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PRICKLE1Q96MT3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
PRICKLE1Q96MT3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 DUSP8P5-201ENST00000422884 1815 ntBASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 MIR6084-201ENST00000622012 110 ntBASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 AC068587.7-201ENST00000641602 218 ntBASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PRICKLE1Q96MT3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
PRICKLE1Q96MT3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 AC010141.3-201ENST00000456659 717 ntBASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PRICKLE1Q96MT3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PRICKLE1Q96MT3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PRICKLE1Q96MT3 LINC01960-201ENST00000563759 1884 ntBASIC22.52■■□□□ 1.2
PRICKLE1Q96MT3 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.52■■□□□ 1.2
PRICKLE1Q96MT3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PRICKLE1Q96MT3 AC097381.1-201ENST00000429019 1296 ntBASIC22.52■■□□□ 1.2
PRICKLE1Q96MT3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.52■■□□□ 1.2
PRICKLE1Q96MT3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
PRICKLE1Q96MT3 MIR6821-201ENST00000617625 74 ntBASIC22.52■■□□□ 1.2
PRICKLE1Q96MT3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.52■■□□□ 1.2
PRICKLE1Q96MT3 AL358852.1-201ENST00000623174 1268 ntBASIC22.52■■□□□ 1.2
PRICKLE1Q96MT3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PRICKLE1Q96MT3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PRICKLE1Q96MT3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 AC087623.3-201ENST00000607047 1098 ntBASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 AL354811.1-201ENST00000610286 706 ntBASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
PRICKLE1Q96MT3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
PRICKLE1Q96MT3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms