Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 SMUG1P1-201ENST00000590640 811 ntBASIC18.65■□□□□ 0.58
SPG11Q96JI7 AC104187.1-201ENST00000607510 612 ntBASIC18.65■□□□□ 0.58
SPG11Q96JI7 ITM2C-210ENST00000620962 501 ntBASIC18.65■□□□□ 0.58
SPG11Q96JI7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPG11Q96JI7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPG11Q96JI7 KRT87P-202ENST00000534226 1464 ntBASIC18.65■□□□□ 0.58
SPG11Q96JI7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.65■□□□□ 0.58
SPG11Q96JI7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.65■□□□□ 0.58
SPG11Q96JI7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.65■□□□□ 0.58
SPG11Q96JI7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
SPG11Q96JI7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPG11Q96JI7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPG11Q96JI7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPG11Q96JI7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SPG11Q96JI7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SPG11Q96JI7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.64■□□□□ 0.58
SPG11Q96JI7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.64■□□□□ 0.57
SPG11Q96JI7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPG11Q96JI7 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPG11Q96JI7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPG11Q96JI7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPG11Q96JI7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPG11Q96JI7 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SPG11Q96JI7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.64■□□□□ 0.57
SPG11Q96JI7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.64■□□□□ 0.57
SPG11Q96JI7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.64■□□□□ 0.57
SPG11Q96JI7 AL121832.2-201ENST00000610979 668 ntBASIC18.64■□□□□ 0.57
SPG11Q96JI7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SPG11Q96JI7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SPG11Q96JI7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPG11Q96JI7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPG11Q96JI7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.63■□□□□ 0.57
SPG11Q96JI7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.63■□□□□ 0.57
SPG11Q96JI7 AC231657.2-201ENST00000624556 255 ntBASIC18.63■□□□□ 0.57
SPG11Q96JI7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPG11Q96JI7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPG11Q96JI7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
SPG11Q96JI7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.63■□□□□ 0.57
SPG11Q96JI7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SPG11Q96JI7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SPG11Q96JI7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SPG11Q96JI7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPG11Q96JI7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPG11Q96JI7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPG11Q96JI7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC18.62■□□□□ 0.57
SPG11Q96JI7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPG11Q96JI7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.62■□□□□ 0.57
SPG11Q96JI7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.62■□□□□ 0.57
SPG11Q96JI7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.62■□□□□ 0.57
SPG11Q96JI7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SPG11Q96JI7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPG11Q96JI7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.62■□□□□ 0.57
SPG11Q96JI7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.62■□□□□ 0.57
SPG11Q96JI7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPG11Q96JI7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SPG11Q96JI7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPG11Q96JI7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPG11Q96JI7 AC133552.2-202ENST00000575694 574 ntBASIC18.61■□□□□ 0.57
SPG11Q96JI7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPG11Q96JI7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SPG11Q96JI7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SPG11Q96JI7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SPG11Q96JI7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.61■□□□□ 0.57
SPG11Q96JI7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPG11Q96JI7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPG11Q96JI7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPG11Q96JI7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.6■□□□□ 0.57
SPG11Q96JI7 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.6■□□□□ 0.57
SPG11Q96JI7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.6■□□□□ 0.57
SPG11Q96JI7 MYCNOS-205ENST00000641950 531 ntBASIC18.6■□□□□ 0.57
SPG11Q96JI7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SPG11Q96JI7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPG11Q96JI7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPG11Q96JI7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.6■□□□□ 0.57
SPG11Q96JI7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SPG11Q96JI7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SPG11Q96JI7 AC079140.4-201ENST00000507448 529 ntBASIC18.6■□□□□ 0.57
SPG11Q96JI7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.6■□□□□ 0.57
SPG11Q96JI7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPG11Q96JI7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SPG11Q96JI7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SPG11Q96JI7 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPG11Q96JI7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPG11Q96JI7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.59■□□□□ 0.57
SPG11Q96JI7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPG11Q96JI7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.59■□□□□ 0.57
SPG11Q96JI7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.59■□□□□ 0.57
SPG11Q96JI7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPG11Q96JI7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPG11Q96JI7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.59■□□□□ 0.57
SPG11Q96JI7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.59■□□□□ 0.57
SPG11Q96JI7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SPG11Q96JI7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SPG11Q96JI7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.58■□□□□ 0.57
SPG11Q96JI7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPG11Q96JI7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SPG11Q96JI7 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SPG11Q96JI7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SPG11Q96JI7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SPG11Q96JI7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms