Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.93■■□□□ 1.58
USP6NLQ92738 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
USP6NLQ92738 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
USP6NLQ92738 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.93■■□□□ 1.58
USP6NLQ92738 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.93■■□□□ 1.58
USP6NLQ92738 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.93■■□□□ 1.58
USP6NLQ92738 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
USP6NLQ92738 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
USP6NLQ92738 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
USP6NLQ92738 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.92■■□□□ 1.58
USP6NLQ92738 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
USP6NLQ92738 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.92■■□□□ 1.58
USP6NLQ92738 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
USP6NLQ92738 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
USP6NLQ92738 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.91■■□□□ 1.58
USP6NLQ92738 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC24.91■■□□□ 1.58
USP6NLQ92738 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.91■■□□□ 1.58
USP6NLQ92738 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
USP6NLQ92738 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
USP6NLQ92738 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC24.91■■□□□ 1.58
USP6NLQ92738 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC24.91■■□□□ 1.58
USP6NLQ92738 CD99P1-205ENST00000527459 561 ntBASIC24.91■■□□□ 1.58
USP6NLQ92738 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.91■■□□□ 1.58
USP6NLQ92738 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
USP6NLQ92738 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
USP6NLQ92738 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.91■■□□□ 1.58
USP6NLQ92738 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.91■■□□□ 1.58
USP6NLQ92738 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
USP6NLQ92738 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.9■■□□□ 1.58
USP6NLQ92738 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
USP6NLQ92738 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.9■■□□□ 1.58
USP6NLQ92738 GUSBP6-202ENST00000438529 1198 ntBASIC24.9■■□□□ 1.58
USP6NLQ92738 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
USP6NLQ92738 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.9■■□□□ 1.58
USP6NLQ92738 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.9■■□□□ 1.58
USP6NLQ92738 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.9■■□□□ 1.58
USP6NLQ92738 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
USP6NLQ92738 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.89■■□□□ 1.58
USP6NLQ92738 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
USP6NLQ92738 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
USP6NLQ92738 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
USP6NLQ92738 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.89■■□□□ 1.58
USP6NLQ92738 AL121832.2-201ENST00000610979 668 ntBASIC24.89■■□□□ 1.58
USP6NLQ92738 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.89■■□□□ 1.58
USP6NLQ92738 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.89■■□□□ 1.57
USP6NLQ92738 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
USP6NLQ92738 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.88■■□□□ 1.57
USP6NLQ92738 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.88■■□□□ 1.57
USP6NLQ92738 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.88■■□□□ 1.57
USP6NLQ92738 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
USP6NLQ92738 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.88■■□□□ 1.57
USP6NLQ92738 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
USP6NLQ92738 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
USP6NLQ92738 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
USP6NLQ92738 APTR-205ENST00000447009 902 ntTSL 2 BASIC24.88■■□□□ 1.57
USP6NLQ92738 TSPY6P-201ENST00000448518 926 ntBASIC24.88■■□□□ 1.57
USP6NLQ92738 AC083906.2-201ENST00000511578 360 ntBASIC24.88■■□□□ 1.57
USP6NLQ92738 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.88■■□□□ 1.57
USP6NLQ92738 DUX4L16-201ENST00000555130 1264 ntBASIC24.88■■□□□ 1.57
USP6NLQ92738 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.88■■□□□ 1.57
USP6NLQ92738 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
USP6NLQ92738 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
USP6NLQ92738 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
USP6NLQ92738 SLC7A5P2-201ENST00000553010 536 ntBASIC24.87■■□□□ 1.57
USP6NLQ92738 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.87■■□□□ 1.57
USP6NLQ92738 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
USP6NLQ92738 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.87■■□□□ 1.57
USP6NLQ92738 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
USP6NLQ92738 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
USP6NLQ92738 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
USP6NLQ92738 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
USP6NLQ92738 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
USP6NLQ92738 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.86■■□□□ 1.57
USP6NLQ92738 AC104187.1-201ENST00000607510 612 ntBASIC24.86■■□□□ 1.57
USP6NLQ92738 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.86■■□□□ 1.57
USP6NLQ92738 AL353803.4-201ENST00000565882 1934 ntBASIC24.86■■□□□ 1.57
USP6NLQ92738 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
USP6NLQ92738 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
USP6NLQ92738 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
USP6NLQ92738 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.85■■□□□ 1.57
USP6NLQ92738 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
USP6NLQ92738 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
USP6NLQ92738 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
USP6NLQ92738 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.85■■□□□ 1.57
USP6NLQ92738 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
USP6NLQ92738 AC005224.4-201ENST00000583262 1652 ntBASIC24.85■■□□□ 1.57
USP6NLQ92738 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
USP6NLQ92738 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.84■■□□□ 1.57
USP6NLQ92738 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.84■■□□□ 1.57
USP6NLQ92738 TSPY20P-201ENST00000450910 630 ntBASIC24.84■■□□□ 1.57
USP6NLQ92738 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.84■■□□□ 1.57
USP6NLQ92738 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.84■■□□□ 1.57
USP6NLQ92738 AC231657.2-201ENST00000624556 255 ntBASIC24.84■■□□□ 1.57
USP6NLQ92738 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.84■■□□□ 1.57
USP6NLQ92738 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
USP6NLQ92738 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
USP6NLQ92738 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
USP6NLQ92738 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.83■■□□□ 1.57
USP6NLQ92738 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
USP6NLQ92738 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms