Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HIPK4Q8NE63 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HIPK4Q8NE63 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIPK4Q8NE63 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HIPK4Q8NE63 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HIPK4Q8NE63 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIPK4Q8NE63 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
HIPK4Q8NE63 BHLHE23-202ENST00000612929 1109 ntBASIC21.09■□□□□ 0.97
HIPK4Q8NE63 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HIPK4Q8NE63 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HIPK4Q8NE63 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIPK4Q8NE63 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIPK4Q8NE63 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HIPK4Q8NE63 AC010542.4-201ENST00000563151 1910 ntBASIC21.08■□□□□ 0.97
HIPK4Q8NE63 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIPK4Q8NE63 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HIPK4Q8NE63 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIPK4Q8NE63 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
HIPK4Q8NE63 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
HIPK4Q8NE63 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.08■□□□□ 0.97
HIPK4Q8NE63 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIPK4Q8NE63 AC074183.2-201ENST00000623112 922 ntBASIC21.08■□□□□ 0.97
HIPK4Q8NE63 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HIPK4Q8NE63 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HIPK4Q8NE63 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HIPK4Q8NE63 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
HIPK4Q8NE63 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HIPK4Q8NE63 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK4Q8NE63 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK4Q8NE63 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.07■□□□□ 0.96
HIPK4Q8NE63 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK4Q8NE63 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK4Q8NE63 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK4Q8NE63 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK4Q8NE63 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK4Q8NE63 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.07■□□□□ 0.96
HIPK4Q8NE63 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK4Q8NE63 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.07■□□□□ 0.96
HIPK4Q8NE63 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK4Q8NE63 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK4Q8NE63 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.06■□□□□ 0.96
HIPK4Q8NE63 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK4Q8NE63 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK4Q8NE63 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK4Q8NE63 KRT18P24-201ENST00000344739 1156 ntBASIC21.06■□□□□ 0.96
HIPK4Q8NE63 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
HIPK4Q8NE63 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK4Q8NE63 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK4Q8NE63 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK4Q8NE63 AC087742.1-201ENST00000575880 1738 ntBASIC21.06■□□□□ 0.96
HIPK4Q8NE63 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK4Q8NE63 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK4Q8NE63 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK4Q8NE63 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK4Q8NE63 AF131216.4-201ENST00000638924 1588 ntBASIC21.06■□□□□ 0.96
HIPK4Q8NE63 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 MIR4281-201ENST00000580852 62 ntBASIC21.05■□□□□ 0.96
HIPK4Q8NE63 THA1P-201ENST00000590384 1145 ntBASIC21.05■□□□□ 0.96
HIPK4Q8NE63 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.05■□□□□ 0.96
HIPK4Q8NE63 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK4Q8NE63 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HIPK4Q8NE63 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
HIPK4Q8NE63 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK4Q8NE63 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK4Q8NE63 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.04■□□□□ 0.96
HIPK4Q8NE63 AC004987.1-201ENST00000428627 508 ntBASIC21.04■□□□□ 0.96
HIPK4Q8NE63 ATP5G2P3-201ENST00000429083 425 ntBASIC21.04■□□□□ 0.96
HIPK4Q8NE63 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.04■□□□□ 0.96
HIPK4Q8NE63 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.04■□□□□ 0.96
HIPK4Q8NE63 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.04■□□□□ 0.96
HIPK4Q8NE63 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.04■□□□□ 0.96
HIPK4Q8NE63 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK4Q8NE63 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK4Q8NE63 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
HIPK4Q8NE63 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIPK4Q8NE63 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIPK4Q8NE63 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIPK4Q8NE63 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIPK4Q8NE63 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.03■□□□□ 0.96
HIPK4Q8NE63 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIPK4Q8NE63 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.03■□□□□ 0.96
HIPK4Q8NE63 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HIPK4Q8NE63 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIPK4Q8NE63 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.03■□□□□ 0.96
HIPK4Q8NE63 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HIPK4Q8NE63 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms