Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LINC01561Q8N1V8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LINC01561Q8N1V8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 AC103834.1-201ENST00000520383 144 ntBASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 FAM99A-202ENST00000538190 1989 ntBASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LINC01561Q8N1V8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01561Q8N1V8 BX664725.1-201ENST00000438252 379 ntBASIC14.6□□□□□ -0.07
LINC01561Q8N1V8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.6□□□□□ -0.07
LINC01561Q8N1V8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
LINC01561Q8N1V8 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LINC01561Q8N1V8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
LINC01561Q8N1V8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC14.6□□□□□ -0.07
LINC01561Q8N1V8 AL031848.2-201ENST00000607670 837 ntBASIC14.6□□□□□ -0.07
LINC01561Q8N1V8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01561Q8N1V8 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01561Q8N1V8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC14.6□□□□□ -0.07
LINC01561Q8N1V8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01561Q8N1V8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01561Q8N1V8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
LINC01561Q8N1V8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 AC026310.3-201ENST00000625186 2373 ntBASIC14.59□□□□□ -0.07
LINC01561Q8N1V8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01561Q8N1V8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01561Q8N1V8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01561Q8N1V8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01561Q8N1V8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.07
LINC01561Q8N1V8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
LINC01561Q8N1V8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 AC012354.3-201ENST00000623734 483 ntBASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 AC004687.1-201ENST00000579003 1625 ntBASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LINC01561Q8N1V8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.57□□□□□ -0.08
LINC01561Q8N1V8 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms