Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.43■■□□□ 1.5
RNF180Q86T96 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF180Q86T96 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RNF180Q86T96 TSPY6P-201ENST00000448518 926 ntBASIC24.42■■□□□ 1.5
RNF180Q86T96 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RNF180Q86T96 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
RNF180Q86T96 AC104187.1-201ENST00000607510 612 ntBASIC24.42■■□□□ 1.5
RNF180Q86T96 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF180Q86T96 KRT87P-202ENST00000534226 1464 ntBASIC24.42■■□□□ 1.5
RNF180Q86T96 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF180Q86T96 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF180Q86T96 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF180Q86T96 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.42■■□□□ 1.5
RNF180Q86T96 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RNF180Q86T96 AL353803.4-201ENST00000565882 1934 ntBASIC24.41■■□□□ 1.5
RNF180Q86T96 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.41■■□□□ 1.5
RNF180Q86T96 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF180Q86T96 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF180Q86T96 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC24.41■■□□□ 1.5
RNF180Q86T96 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.41■■□□□ 1.5
RNF180Q86T96 AL050303.2-201ENST00000619798 666 ntBASIC24.41■■□□□ 1.5
RNF180Q86T96 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF180Q86T96 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF180Q86T96 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF180Q86T96 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.4■■□□□ 1.5
RNF180Q86T96 AC007322.1-201ENST00000426983 750 ntBASIC24.4■■□□□ 1.5
RNF180Q86T96 TSPY20P-201ENST00000450910 630 ntBASIC24.4■■□□□ 1.5
RNF180Q86T96 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.4■■□□□ 1.5
RNF180Q86T96 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF180Q86T96 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF180Q86T96 AC005224.4-201ENST00000583262 1652 ntBASIC24.4■■□□□ 1.5
RNF180Q86T96 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.5
RNF180Q86T96 AC009237.3-201ENST00000393279 1427 ntBASIC24.39■■□□□ 1.5
RNF180Q86T96 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC24.39■■□□□ 1.5
RNF180Q86T96 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF180Q86T96 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RNF180Q86T96 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RNF180Q86T96 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.39■■□□□ 1.49
RNF180Q86T96 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RNF180Q86T96 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC24.39■■□□□ 1.49
RNF180Q86T96 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RNF180Q86T96 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF180Q86T96 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RNF180Q86T96 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF180Q86T96 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF180Q86T96 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF180Q86T96 KRT18P6-201ENST00000555540 1265 ntBASIC24.38■■□□□ 1.49
RNF180Q86T96 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.38■■□□□ 1.49
RNF180Q86T96 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF180Q86T96 AC005181.1-201ENST00000604782 1256 ntBASIC24.38■■□□□ 1.49
RNF180Q86T96 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
RNF180Q86T96 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF180Q86T96 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF180Q86T96 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF180Q86T96 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF180Q86T96 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.37■■□□□ 1.49
RNF180Q86T96 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF180Q86T96 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.37■■□□□ 1.49
RNF180Q86T96 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.37■■□□□ 1.49
RNF180Q86T96 DUX4L16-201ENST00000555130 1264 ntBASIC24.37■■□□□ 1.49
RNF180Q86T96 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.37■■□□□ 1.49
RNF180Q86T96 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF180Q86T96 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF180Q86T96 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF180Q86T96 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RNF180Q86T96 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.36■■□□□ 1.49
RNF180Q86T96 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.36■■□□□ 1.49
RNF180Q86T96 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF180Q86T96 SLC7A5P2-201ENST00000553010 536 ntBASIC24.36■■□□□ 1.49
RNF180Q86T96 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.36■■□□□ 1.49
RNF180Q86T96 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.36■■□□□ 1.49
RNF180Q86T96 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
RNF180Q86T96 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.35■■□□□ 1.49
RNF180Q86T96 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RNF180Q86T96 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF180Q86T96 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF180Q86T96 SLC29A4P1-201ENST00000398760 971 ntBASIC24.35■■□□□ 1.49
RNF180Q86T96 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.35■■□□□ 1.49
RNF180Q86T96 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.35■■□□□ 1.49
RNF180Q86T96 UBE2DNL-204ENST00000602536 740 ntBASIC24.35■■□□□ 1.49
RNF180Q86T96 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.35■■□□□ 1.49
RNF180Q86T96 AC066615.1-201ENST00000640911 628 ntBASIC24.35■■□□□ 1.49
RNF180Q86T96 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RNF180Q86T96 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF180Q86T96 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF180Q86T96 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.35■■□□□ 1.49
RNF180Q86T96 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF180Q86T96 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
RNF180Q86T96 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.34■■□□□ 1.49
RNF180Q86T96 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.34■■□□□ 1.49
RNF180Q86T96 PFKL-212ENST00000628044 129 ntTSL 3 BASIC24.34■■□□□ 1.49
RNF180Q86T96 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.34■■□□□ 1.49
RNF180Q86T96 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.34■■□□□ 1.49
RNF180Q86T96 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF180Q86T96 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF180Q86T96 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.33■■□□□ 1.49
RNF180Q86T96 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF180Q86T96 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RNF180Q86T96 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF180Q86T96 GUSBP6-202ENST00000438529 1198 ntBASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms