Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 AC004687.1-201ENST00000579003 1625 ntBASIC19.67■□□□□ 0.74
RTL6Q6ICC9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.67■□□□□ 0.74
RTL6Q6ICC9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 KRT18P14-201ENST00000534205 1250 ntBASIC19.67■□□□□ 0.74
RTL6Q6ICC9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 AC092437.1-201ENST00000624794 1048 ntBASIC19.67■□□□□ 0.74
RTL6Q6ICC9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 LINC02228-203ENST00000641970 1355 ntBASIC19.67■□□□□ 0.74
RTL6Q6ICC9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RTL6Q6ICC9 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.66■□□□□ 0.74
RTL6Q6ICC9 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.66■□□□□ 0.74
RTL6Q6ICC9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL6Q6ICC9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.66■□□□□ 0.74
RTL6Q6ICC9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL6Q6ICC9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL6Q6ICC9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.66■□□□□ 0.74
RTL6Q6ICC9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.66■□□□□ 0.74
RTL6Q6ICC9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.66■□□□□ 0.74
RTL6Q6ICC9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.66■□□□□ 0.74
RTL6Q6ICC9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.66■□□□□ 0.74
RTL6Q6ICC9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL6Q6ICC9 AC079834.2-201ENST00000609776 1949 ntBASIC19.66■□□□□ 0.74
RTL6Q6ICC9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RTL6Q6ICC9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.66■□□□□ 0.74
RTL6Q6ICC9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RTL6Q6ICC9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 AL353803.4-201ENST00000565882 1934 ntBASIC19.65■□□□□ 0.74
RTL6Q6ICC9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RTL6Q6ICC9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.64■□□□□ 0.73
RTL6Q6ICC9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTL6Q6ICC9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.64■□□□□ 0.73
RTL6Q6ICC9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.64■□□□□ 0.73
RTL6Q6ICC9 AL137784.2-201ENST00000607332 1000 ntBASIC19.64■□□□□ 0.73
RTL6Q6ICC9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.64■□□□□ 0.73
RTL6Q6ICC9 RARRES2P11-201ENST00000635158 484 ntBASIC19.64■□□□□ 0.73
RTL6Q6ICC9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTL6Q6ICC9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTL6Q6ICC9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
RTL6Q6ICC9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTL6Q6ICC9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTL6Q6ICC9 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTL6Q6ICC9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTL6Q6ICC9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 NTF6G-201ENST00000591094 616 ntBASIC19.63■□□□□ 0.73
RTL6Q6ICC9 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL6Q6ICC9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL6Q6ICC9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.62■□□□□ 0.73
RTL6Q6ICC9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTL6Q6ICC9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL6Q6ICC9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms