Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC27.91■■■□□ 2.06
RC3H1Q5TC82 TFG-210ENST00000620299 1289 ntTSL 5 BASIC27.91■■■□□ 2.06
RC3H1Q5TC82 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
RC3H1Q5TC82 KRT87P-202ENST00000534226 1464 ntBASIC27.9■■■□□ 2.06
RC3H1Q5TC82 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC27.9■■■□□ 2.06
RC3H1Q5TC82 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
RC3H1Q5TC82 METTL15-202ENST00000403099 795 ntTSL 5 BASIC27.9■■■□□ 2.06
RC3H1Q5TC82 TSPY20P-201ENST00000450910 630 ntBASIC27.9■■■□□ 2.06
RC3H1Q5TC82 KRT18P6-201ENST00000555540 1265 ntBASIC27.9■■■□□ 2.06
RC3H1Q5TC82 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
RC3H1Q5TC82 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC27.9■■■□□ 2.06
RC3H1Q5TC82 AL353803.4-201ENST00000565882 1934 ntBASIC27.9■■■□□ 2.06
RC3H1Q5TC82 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
RC3H1Q5TC82 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
RC3H1Q5TC82 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC27.89■■■□□ 2.06
RC3H1Q5TC82 OAS3-207ENST00000551007 998 ntTSL 2 BASIC27.89■■■□□ 2.06
RC3H1Q5TC82 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC27.89■■■□□ 2.06
RC3H1Q5TC82 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC27.89■■■□□ 2.06
RC3H1Q5TC82 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC27.89■■■□□ 2.06
RC3H1Q5TC82 PARP1-210ENST00000629232 477 ntTSL 5 BASIC27.89■■■□□ 2.06
RC3H1Q5TC82 AC009237.3-201ENST00000393279 1427 ntBASIC27.89■■■□□ 2.06
RC3H1Q5TC82 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.89■■■□□ 2.05
RC3H1Q5TC82 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
RC3H1Q5TC82 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
RC3H1Q5TC82 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
RC3H1Q5TC82 AC007322.1-201ENST00000426983 750 ntBASIC27.88■■■□□ 2.05
RC3H1Q5TC82 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC27.88■■■□□ 2.05
RC3H1Q5TC82 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC27.88■■■□□ 2.05
RC3H1Q5TC82 AC066615.1-201ENST00000640911 628 ntBASIC27.88■■■□□ 2.05
RC3H1Q5TC82 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
RC3H1Q5TC82 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.87■■■□□ 2.05
RC3H1Q5TC82 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
RC3H1Q5TC82 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC27.87■■■□□ 2.05
RC3H1Q5TC82 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC27.87■■■□□ 2.05
RC3H1Q5TC82 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC27.87■■■□□ 2.05
RC3H1Q5TC82 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
RC3H1Q5TC82 AC005181.1-201ENST00000604782 1256 ntBASIC27.87■■■□□ 2.05
RC3H1Q5TC82 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
RC3H1Q5TC82 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
RC3H1Q5TC82 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC27.86■■■□□ 2.05
RC3H1Q5TC82 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
RC3H1Q5TC82 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
RC3H1Q5TC82 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
RC3H1Q5TC82 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC27.86■■■□□ 2.05
RC3H1Q5TC82 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC27.86■■■□□ 2.05
RC3H1Q5TC82 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC27.86■■■□□ 2.05
RC3H1Q5TC82 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
RC3H1Q5TC82 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
RC3H1Q5TC82 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
RC3H1Q5TC82 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
RC3H1Q5TC82 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC27.86■■■□□ 2.05
RC3H1Q5TC82 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
RC3H1Q5TC82 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC27.85■■■□□ 2.05
RC3H1Q5TC82 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RC3H1Q5TC82 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RC3H1Q5TC82 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RC3H1Q5TC82 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC27.85■■■□□ 2.05
RC3H1Q5TC82 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RC3H1Q5TC82 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
RC3H1Q5TC82 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC27.85■■■□□ 2.05
RC3H1Q5TC82 KLF13-207ENST00000560473 489 ntTSL 3 BASIC27.85■■■□□ 2.05
RC3H1Q5TC82 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RC3H1Q5TC82 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RC3H1Q5TC82 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RC3H1Q5TC82 PARP1-202ENST00000366792 553 ntTSL 3 BASIC27.84■■■□□ 2.05
RC3H1Q5TC82 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC27.84■■■□□ 2.05
RC3H1Q5TC82 UBE2DNL-204ENST00000602536 740 ntBASIC27.84■■■□□ 2.05
RC3H1Q5TC82 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC27.84■■■□□ 2.05
RC3H1Q5TC82 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RC3H1Q5TC82 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
RC3H1Q5TC82 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RC3H1Q5TC82 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC27.83■■■□□ 2.05
RC3H1Q5TC82 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC27.83■■■□□ 2.05
RC3H1Q5TC82 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC27.83■■■□□ 2.05
RC3H1Q5TC82 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RC3H1Q5TC82 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RC3H1Q5TC82 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.83■■■□□ 2.04
RC3H1Q5TC82 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
RC3H1Q5TC82 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RC3H1Q5TC82 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
RC3H1Q5TC82 AL138781.1-201ENST00000566567 1274 ntBASIC27.82■■■□□ 2.04
RC3H1Q5TC82 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
RC3H1Q5TC82 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC27.82■■■□□ 2.04
RC3H1Q5TC82 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC27.82■■■□□ 2.04
RC3H1Q5TC82 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
RC3H1Q5TC82 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.82■■■□□ 2.04
RC3H1Q5TC82 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
RC3H1Q5TC82 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RC3H1Q5TC82 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RC3H1Q5TC82 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC27.81■■■□□ 2.04
RC3H1Q5TC82 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC27.81■■■□□ 2.04
RC3H1Q5TC82 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RC3H1Q5TC82 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
RC3H1Q5TC82 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
RC3H1Q5TC82 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
RC3H1Q5TC82 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RC3H1Q5TC82 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC27.8■■■□□ 2.04
RC3H1Q5TC82 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC27.8■■■□□ 2.04
RC3H1Q5TC82 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC27.8■■■□□ 2.04
RC3H1Q5TC82 MYCNOS-205ENST00000641950 531 ntBASIC27.8■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms