Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TTC39AQ5SRH9 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TTC39AQ5SRH9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.63■■□□□ 1.85
TTC39AQ5SRH9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.63■■□□□ 1.85
TTC39AQ5SRH9 AC097381.1-201ENST00000429019 1296 ntBASIC26.63■■□□□ 1.85
TTC39AQ5SRH9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.63■■□□□ 1.85
TTC39AQ5SRH9 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TTC39AQ5SRH9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
TTC39AQ5SRH9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TTC39AQ5SRH9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC26.62■■□□□ 1.85
TTC39AQ5SRH9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
TTC39AQ5SRH9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
TTC39AQ5SRH9 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.62■■□□□ 1.85
TTC39AQ5SRH9 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
TTC39AQ5SRH9 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TTC39AQ5SRH9 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TTC39AQ5SRH9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.61■■□□□ 1.85
TTC39AQ5SRH9 AC027612.3-201ENST00000413684 1047 ntBASIC26.61■■□□□ 1.85
TTC39AQ5SRH9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TTC39AQ5SRH9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.61■■□□□ 1.85
TTC39AQ5SRH9 AC087623.3-201ENST00000607047 1098 ntBASIC26.61■■□□□ 1.85
TTC39AQ5SRH9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TTC39AQ5SRH9 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
TTC39AQ5SRH9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
TTC39AQ5SRH9 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.61■■□□□ 1.85
TTC39AQ5SRH9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TTC39AQ5SRH9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.6■■□□□ 1.85
TTC39AQ5SRH9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC26.6■■□□□ 1.85
TTC39AQ5SRH9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
TTC39AQ5SRH9 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.6■■□□□ 1.85
TTC39AQ5SRH9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TTC39AQ5SRH9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.6■■□□□ 1.85
TTC39AQ5SRH9 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.6■■□□□ 1.85
TTC39AQ5SRH9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TTC39AQ5SRH9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
TTC39AQ5SRH9 YBX1P1-201ENST00000445822 960 ntBASIC26.59■■□□□ 1.85
TTC39AQ5SRH9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.59■■□□□ 1.85
TTC39AQ5SRH9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.59■■□□□ 1.85
TTC39AQ5SRH9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.59■■□□□ 1.85
TTC39AQ5SRH9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
TTC39AQ5SRH9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.59■■□□□ 1.85
TTC39AQ5SRH9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
TTC39AQ5SRH9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.59■■□□□ 1.85
TTC39AQ5SRH9 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
TTC39AQ5SRH9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.58■■□□□ 1.85
TTC39AQ5SRH9 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TTC39AQ5SRH9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.58■■□□□ 1.85
TTC39AQ5SRH9 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TTC39AQ5SRH9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.84
TTC39AQ5SRH9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
TTC39AQ5SRH9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TTC39AQ5SRH9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TTC39AQ5SRH9 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC26.57■■□□□ 1.84
TTC39AQ5SRH9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
TTC39AQ5SRH9 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.57■■□□□ 1.84
TTC39AQ5SRH9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.57■■□□□ 1.84
TTC39AQ5SRH9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.57■■□□□ 1.84
TTC39AQ5SRH9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TTC39AQ5SRH9 SMUG1P1-201ENST00000590640 811 ntBASIC26.57■■□□□ 1.84
TTC39AQ5SRH9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.57■■□□□ 1.84
TTC39AQ5SRH9 MIR5787-201ENST00000611784 55 ntBASIC26.57■■□□□ 1.84
TTC39AQ5SRH9 C9orf163-202ENST00000624034 2573 ntBASIC26.57■■□□□ 1.84
TTC39AQ5SRH9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
TTC39AQ5SRH9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.57■■□□□ 1.84
TTC39AQ5SRH9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
TTC39AQ5SRH9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TTC39AQ5SRH9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
TTC39AQ5SRH9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TTC39AQ5SRH9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TTC39AQ5SRH9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
TTC39AQ5SRH9 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.56■■□□□ 1.84
TTC39AQ5SRH9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
TTC39AQ5SRH9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
TTC39AQ5SRH9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TTC39AQ5SRH9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.55■■□□□ 1.84
TTC39AQ5SRH9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.55■■□□□ 1.84
TTC39AQ5SRH9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.55■■□□□ 1.84
TTC39AQ5SRH9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.55■■□□□ 1.84
TTC39AQ5SRH9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.55■■□□□ 1.84
TTC39AQ5SRH9 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TTC39AQ5SRH9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
TTC39AQ5SRH9 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
TTC39AQ5SRH9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
TTC39AQ5SRH9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.54■■□□□ 1.84
TTC39AQ5SRH9 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC39AQ5SRH9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC39AQ5SRH9 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TTC39AQ5SRH9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TTC39AQ5SRH9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TTC39AQ5SRH9 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC26.54■■□□□ 1.84
TTC39AQ5SRH9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC39AQ5SRH9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
TTC39AQ5SRH9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.54■■□□□ 1.84
TTC39AQ5SRH9 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.54■■□□□ 1.84
TTC39AQ5SRH9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC39AQ5SRH9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.53■■□□□ 1.84
TTC39AQ5SRH9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TTC39AQ5SRH9 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TTC39AQ5SRH9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TTC39AQ5SRH9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 241.4 ms