Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6AP1LQ52LC2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6AP1LQ52LC2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP6AP1LQ52LC2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP6AP1LQ52LC2 AC010997.5-201ENST00000609182 354 ntBASIC21.07■□□□□ 0.96
ATP6AP1LQ52LC2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP6AP1LQ52LC2 C17orf82-201ENST00000623772 1530 ntBASIC21.07■□□□□ 0.96
ATP6AP1LQ52LC2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6AP1LQ52LC2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6AP1LQ52LC2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP6AP1LQ52LC2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ATP6AP1LQ52LC2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP6AP1LQ52LC2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.06■□□□□ 0.96
ATP6AP1LQ52LC2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP6AP1LQ52LC2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP6AP1LQ52LC2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP6AP1LQ52LC2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP6AP1LQ52LC2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP6AP1LQ52LC2 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ATP6AP1LQ52LC2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ATP6AP1LQ52LC2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP6AP1LQ52LC2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.05■□□□□ 0.96
ATP6AP1LQ52LC2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.05■□□□□ 0.96
ATP6AP1LQ52LC2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP6AP1LQ52LC2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.05■□□□□ 0.96
ATP6AP1LQ52LC2 AC239859.2-201ENST00000444165 318 ntBASIC21.05■□□□□ 0.96
ATP6AP1LQ52LC2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.05■□□□□ 0.96
ATP6AP1LQ52LC2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ATP6AP1LQ52LC2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP6AP1LQ52LC2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ATP6AP1LQ52LC2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP6AP1LQ52LC2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.05■□□□□ 0.96
ATP6AP1LQ52LC2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP6AP1LQ52LC2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP6AP1LQ52LC2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
ATP6AP1LQ52LC2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ATP6AP1LQ52LC2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP6AP1LQ52LC2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.04■□□□□ 0.96
ATP6AP1LQ52LC2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP6AP1LQ52LC2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP6AP1LQ52LC2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
ATP6AP1LQ52LC2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.04■□□□□ 0.96
ATP6AP1LQ52LC2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP6AP1LQ52LC2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP6AP1LQ52LC2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP6AP1LQ52LC2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP6AP1LQ52LC2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.03■□□□□ 0.96
ATP6AP1LQ52LC2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP6AP1LQ52LC2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP6AP1LQ52LC2 TSPY9P-201ENST00000440215 945 ntBASIC21.03■□□□□ 0.96
ATP6AP1LQ52LC2 TSPY11P-201ENST00000442607 1045 ntBASIC21.03■□□□□ 0.96
ATP6AP1LQ52LC2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP6AP1LQ52LC2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
ATP6AP1LQ52LC2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6AP1LQ52LC2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP6AP1LQ52LC2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
ATP6AP1LQ52LC2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6AP1LQ52LC2 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6AP1LQ52LC2 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6AP1LQ52LC2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6AP1LQ52LC2 CA15P2-201ENST00000611168 834 ntBASIC21.02■□□□□ 0.96
ATP6AP1LQ52LC2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP6AP1LQ52LC2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP6AP1LQ52LC2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6AP1LQ52LC2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.02■□□□□ 0.96
ATP6AP1LQ52LC2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.02■□□□□ 0.96
ATP6AP1LQ52LC2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6AP1LQ52LC2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ATP6AP1LQ52LC2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 RARRES2P1-201ENST00000474487 481 ntBASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6AP1LQ52LC2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
ATP6AP1LQ52LC2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ATP6AP1LQ52LC2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21■□□□□ 0.95
ATP6AP1LQ52LC2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP6AP1LQ52LC2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21■□□□□ 0.95
ATP6AP1LQ52LC2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21■□□□□ 0.95
ATP6AP1LQ52LC2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP6AP1LQ52LC2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ATP6AP1LQ52LC2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
ATP6AP1LQ52LC2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP6AP1LQ52LC2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP6AP1LQ52LC2 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP6AP1LQ52LC2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.99■□□□□ 0.95
ATP6AP1LQ52LC2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms