Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC25.69■■□□□ 1.7
SHROOM1Q2M3G4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC25.69■■□□□ 1.7
SHROOM1Q2M3G4 AC006015.1-201ENST00000429970 570 ntBASIC25.69■■□□□ 1.7
SHROOM1Q2M3G4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SHROOM1Q2M3G4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
SHROOM1Q2M3G4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC25.68■■□□□ 1.7
SHROOM1Q2M3G4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SHROOM1Q2M3G4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SHROOM1Q2M3G4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.68■■□□□ 1.7
SHROOM1Q2M3G4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC25.68■■□□□ 1.7
SHROOM1Q2M3G4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
SHROOM1Q2M3G4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SHROOM1Q2M3G4 OXCT2P1-201ENST00000447263 1535 ntBASIC25.68■■□□□ 1.7
SHROOM1Q2M3G4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SHROOM1Q2M3G4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.67■■□□□ 1.7
SHROOM1Q2M3G4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SHROOM1Q2M3G4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHROOM1Q2M3G4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
SHROOM1Q2M3G4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHROOM1Q2M3G4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHROOM1Q2M3G4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC25.67■■□□□ 1.7
SHROOM1Q2M3G4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.67■■□□□ 1.7
SHROOM1Q2M3G4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.67■■□□□ 1.7
SHROOM1Q2M3G4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC25.67■■□□□ 1.7
SHROOM1Q2M3G4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.67■■□□□ 1.7
SHROOM1Q2M3G4 AC068587.7-201ENST00000641602 218 ntBASIC25.67■■□□□ 1.7
SHROOM1Q2M3G4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
SHROOM1Q2M3G4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SHROOM1Q2M3G4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC25.66■■□□□ 1.7
SHROOM1Q2M3G4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHROOM1Q2M3G4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.66■■□□□ 1.7
SHROOM1Q2M3G4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHROOM1Q2M3G4 AC092068.2-201ENST00000590491 1708 ntBASIC25.66■■□□□ 1.7
SHROOM1Q2M3G4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
SHROOM1Q2M3G4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
SHROOM1Q2M3G4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC25.66■■□□□ 1.7
SHROOM1Q2M3G4 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.66■■□□□ 1.7
SHROOM1Q2M3G4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHROOM1Q2M3G4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHROOM1Q2M3G4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SHROOM1Q2M3G4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SHROOM1Q2M3G4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
SHROOM1Q2M3G4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SHROOM1Q2M3G4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHROOM1Q2M3G4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SHROOM1Q2M3G4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
SHROOM1Q2M3G4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.65■■□□□ 1.7
SHROOM1Q2M3G4 RAP2CP1-201ENST00000605103 478 ntBASIC25.65■■□□□ 1.7
SHROOM1Q2M3G4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.65■■□□□ 1.7
SHROOM1Q2M3G4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHROOM1Q2M3G4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHROOM1Q2M3G4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
SHROOM1Q2M3G4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC25.64■■□□□ 1.7
SHROOM1Q2M3G4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SHROOM1Q2M3G4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.64■■□□□ 1.7
SHROOM1Q2M3G4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
SHROOM1Q2M3G4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.64■■□□□ 1.7
SHROOM1Q2M3G4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC25.64■■□□□ 1.7
SHROOM1Q2M3G4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
SHROOM1Q2M3G4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SHROOM1Q2M3G4 AC137761.2-201ENST00000561729 223 ntBASIC25.64■■□□□ 1.7
SHROOM1Q2M3G4 AC145350.3-201ENST00000569033 163 ntBASIC25.64■■□□□ 1.7
SHROOM1Q2M3G4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC25.64■■□□□ 1.7
SHROOM1Q2M3G4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
SHROOM1Q2M3G4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.64■■□□□ 1.69
SHROOM1Q2M3G4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.64■■□□□ 1.69
SHROOM1Q2M3G4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC25.63■■□□□ 1.69
SHROOM1Q2M3G4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SHROOM1Q2M3G4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SHROOM1Q2M3G4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SHROOM1Q2M3G4 AC080038.1-201ENST00000611274 1154 ntBASIC25.63■■□□□ 1.69
SHROOM1Q2M3G4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
SHROOM1Q2M3G4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.63■■□□□ 1.69
SHROOM1Q2M3G4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SHROOM1Q2M3G4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.62■■□□□ 1.69
SHROOM1Q2M3G4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
SHROOM1Q2M3G4 AC087239.1-201ENST00000622671 572 ntBASIC25.62■■□□□ 1.69
SHROOM1Q2M3G4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SHROOM1Q2M3G4 CDCA4P2-201ENST00000441182 718 ntBASIC25.61■■□□□ 1.69
SHROOM1Q2M3G4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.61■■□□□ 1.69
SHROOM1Q2M3G4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
SHROOM1Q2M3G4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.61■■□□□ 1.69
SHROOM1Q2M3G4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHROOM1Q2M3G4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.6■■□□□ 1.69
SHROOM1Q2M3G4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHROOM1Q2M3G4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHROOM1Q2M3G4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SHROOM1Q2M3G4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SHROOM1Q2M3G4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHROOM1Q2M3G4 ID1-201ENST00000376105 1233 ntBASIC25.6■■□□□ 1.69
SHROOM1Q2M3G4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC25.6■■□□□ 1.69
SHROOM1Q2M3G4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.6■■□□□ 1.69
SHROOM1Q2M3G4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SHROOM1Q2M3G4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
SHROOM1Q2M3G4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.59■■□□□ 1.69
SHROOM1Q2M3G4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC25.59■■□□□ 1.69
SHROOM1Q2M3G4 AC073111.5-205ENST00000641717 521 ntBASIC25.59■■□□□ 1.69
SHROOM1Q2M3G4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SHROOM1Q2M3G4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.59■■□□□ 1.69
SHROOM1Q2M3G4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms