Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH13P55290 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDH13P55290 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.31■■□□□ 1
CDH13P55290 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CDH13P55290 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CDH13P55290 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.31■■□□□ 1
CDH13P55290 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH13P55290 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH13P55290 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.31■■□□□ 1
CDH13P55290 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CDH13P55290 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.31■■□□□ 1
CDH13P55290 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDH13P55290 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH13P55290 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDH13P55290 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CDH13P55290 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.31■■□□□ 1
CDH13P55290 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDH13P55290 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH13P55290 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDH13P55290 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH13P55290 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.3■■□□□ 1
CDH13P55290 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDH13P55290 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.3■■□□□ 1
CDH13P55290 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.3■■□□□ 1
CDH13P55290 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.3■■□□□ 1
CDH13P55290 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.3■■□□□ 1
CDH13P55290 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.3■■□□□ 1
CDH13P55290 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.3■■□□□ 1
CDH13P55290 AL117332.1-201ENST00000622628 974 ntBASIC21.3■■□□□ 1
CDH13P55290 PKD1P6-201ENST00000343738 4769 ntBASIC21.3■■□□□ 1
CDH13P55290 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CDH13P55290 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.3■■□□□ 1
CDH13P55290 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH13P55290 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.3■■□□□ 1
CDH13P55290 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CDH13P55290 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDH13P55290 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH13P55290 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CDH13P55290 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDH13P55290 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH13P55290 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.29■■□□□ 1
CDH13P55290 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
CDH13P55290 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.29■■□□□ 1
CDH13P55290 AL499627.2-201ENST00000606283 725 ntBASIC21.29■■□□□ 1
CDH13P55290 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDH13P55290 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH13P55290 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH13P55290 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDH13P55290 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH13P55290 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDH13P55290 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CDH13P55290 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH13P55290 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDH13P55290 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH13P55290 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDH13P55290 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDH13P55290 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.27■■□□□ 1
CDH13P55290 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH13P55290 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.27■■□□□ 1
CDH13P55290 KRT16P3-201ENST00000439127 1283 ntBASIC21.27■■□□□ 1
CDH13P55290 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.27■■□□□ 1
CDH13P55290 CA15P2-201ENST00000611168 834 ntBASIC21.27■■□□□ 1
CDH13P55290 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.27■■□□□ 1
CDH13P55290 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.27■■□□□ 1
CDH13P55290 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH13P55290 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDH13P55290 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
CDH13P55290 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CDH13P55290 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CDH13P55290 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDH13P55290 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
CDH13P55290 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.27■□□□□ 0.99
CDH13P55290 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
CDH13P55290 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH13P55290 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH13P55290 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.26■□□□□ 0.99
CDH13P55290 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
CDH13P55290 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH13P55290 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.26■□□□□ 0.99
CDH13P55290 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH13P55290 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH13P55290 AL035685.1-201ENST00000636663 812 ntBASIC21.26■□□□□ 0.99
CDH13P55290 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDH13P55290 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CDH13P55290 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDH13P55290 AC010542.4-201ENST00000563151 1910 ntBASIC21.25■□□□□ 0.99
CDH13P55290 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH13P55290 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.25■□□□□ 0.99
CDH13P55290 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.25■□□□□ 0.99
CDH13P55290 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDH13P55290 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.25■□□□□ 0.99
CDH13P55290 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.25■□□□□ 0.99
CDH13P55290 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDH13P55290 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.25■□□□□ 0.99
CDH13P55290 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CDH13P55290 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.25■□□□□ 0.99
CDH13P55290 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH13P55290 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CDH13P55290 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDH13P55290 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms