Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NcanP55066 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NcanP55066 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NcanP55066 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NcanP55066 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
NcanP55066 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NcanP55066 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NcanP55066 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NcanP55066 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NcanP55066 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NcanP55066 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NcanP55066 Gm10698-201ENSMUST00000182663 604 ntBASIC20.72■□□□□ 0.91
NcanP55066 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.72■□□□□ 0.91
NcanP55066 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NcanP55066 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NcanP55066 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.72■□□□□ 0.91
NcanP55066 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NcanP55066 Gm13509-201ENSMUST00000119733 1308 ntBASIC20.72■□□□□ 0.91
NcanP55066 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NcanP55066 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NcanP55066 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NcanP55066 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.71■□□□□ 0.91
NcanP55066 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.71■□□□□ 0.91
NcanP55066 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NcanP55066 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NcanP55066 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NcanP55066 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NcanP55066 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
NcanP55066 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NcanP55066 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NcanP55066 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NcanP55066 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NcanP55066 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
NcanP55066 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NcanP55066 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NcanP55066 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.7■□□□□ 0.9
NcanP55066 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NcanP55066 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NcanP55066 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NcanP55066 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NcanP55066 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
NcanP55066 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.7■□□□□ 0.9
NcanP55066 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
NcanP55066 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.69■□□□□ 0.9
NcanP55066 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.69■□□□□ 0.9
NcanP55066 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.69■□□□□ 0.9
NcanP55066 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NcanP55066 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NcanP55066 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NcanP55066 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NcanP55066 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NcanP55066 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NcanP55066 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NcanP55066 Gm2559-201ENSMUST00000201323 363 ntBASIC20.68■□□□□ 0.9
NcanP55066 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NcanP55066 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NcanP55066 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.68■□□□□ 0.9
NcanP55066 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NcanP55066 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NcanP55066 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NcanP55066 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.67■□□□□ 0.9
NcanP55066 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NcanP55066 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NcanP55066 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NcanP55066 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NcanP55066 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NcanP55066 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NcanP55066 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NcanP55066 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.67■□□□□ 0.9
NcanP55066 Dio3-201ENSMUST00000097228 1449 ntBASIC20.67■□□□□ 0.9
NcanP55066 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NcanP55066 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NcanP55066 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NcanP55066 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NcanP55066 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC20.66■□□□□ 0.9
NcanP55066 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NcanP55066 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NcanP55066 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NcanP55066 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NcanP55066 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NcanP55066 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NcanP55066 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NcanP55066 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NcanP55066 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NcanP55066 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NcanP55066 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NcanP55066 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
NcanP55066 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.65■□□□□ 0.9
NcanP55066 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NcanP55066 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NcanP55066 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
NcanP55066 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.65■□□□□ 0.9
NcanP55066 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NcanP55066 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NcanP55066 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NcanP55066 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.64■□□□□ 0.9
NcanP55066 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NcanP55066 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
NcanP55066 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NcanP55066 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms