Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC28.14■■■□□ 2.1
ATP6V1AP38606 AC142086.2-201ENST00000569753 217 ntBASIC28.14■■■□□ 2.1
ATP6V1AP38606 MAZ-216ENST00000616501 991 ntTSL 5 BASIC28.14■■■□□ 2.1
ATP6V1AP38606 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
ATP6V1AP38606 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
ATP6V1AP38606 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ATP6V1AP38606 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
ATP6V1AP38606 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC28.13■■■□□ 2.09
ATP6V1AP38606 AL121832.2-201ENST00000610979 668 ntBASIC28.13■■■□□ 2.09
ATP6V1AP38606 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ATP6V1AP38606 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
ATP6V1AP38606 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC28.13■■■□□ 2.09
ATP6V1AP38606 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
ATP6V1AP38606 USP45-205ENST00000472914 1617 ntTSL 5 BASIC28.12■■■□□ 2.09
ATP6V1AP38606 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
ATP6V1AP38606 AC083906.2-201ENST00000511578 360 ntBASIC28.12■■■□□ 2.09
ATP6V1AP38606 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
ATP6V1AP38606 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC28.12■■■□□ 2.09
ATP6V1AP38606 AC104187.1-201ENST00000607510 612 ntBASIC28.12■■■□□ 2.09
ATP6V1AP38606 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC28.11■■■□□ 2.09
ATP6V1AP38606 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
ATP6V1AP38606 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
ATP6V1AP38606 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
ATP6V1AP38606 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC28.1■■■□□ 2.09
ATP6V1AP38606 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
ATP6V1AP38606 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ATP6V1AP38606 TSPY20P-201ENST00000450910 630 ntBASIC28.1■■■□□ 2.09
ATP6V1AP38606 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC28.1■■■□□ 2.09
ATP6V1AP38606 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ATP6V1AP38606 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC28.1■■■□□ 2.09
ATP6V1AP38606 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
ATP6V1AP38606 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ATP6V1AP38606 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ATP6V1AP38606 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ATP6V1AP38606 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ATP6V1AP38606 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ATP6V1AP38606 TSPY6P-201ENST00000448518 926 ntBASIC28.09■■■□□ 2.09
ATP6V1AP38606 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC28.09■■■□□ 2.09
ATP6V1AP38606 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
ATP6V1AP38606 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ATP6V1AP38606 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
ATP6V1AP38606 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
ATP6V1AP38606 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC28.09■■■□□ 2.09
ATP6V1AP38606 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ATP6V1AP38606 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ATP6V1AP38606 AC005224.4-201ENST00000583262 1652 ntBASIC28.08■■■□□ 2.09
ATP6V1AP38606 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
ATP6V1AP38606 DUX4L16-201ENST00000555130 1264 ntBASIC28.08■■■□□ 2.09
ATP6V1AP38606 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC28.08■■■□□ 2.09
ATP6V1AP38606 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC28.08■■■□□ 2.09
ATP6V1AP38606 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC28.08■■■□□ 2.09
ATP6V1AP38606 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC28.08■■■□□ 2.09
ATP6V1AP38606 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ATP6V1AP38606 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
ATP6V1AP38606 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC28.08■■■□□ 2.09
ATP6V1AP38606 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ATP6V1AP38606 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
ATP6V1AP38606 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
ATP6V1AP38606 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC28.07■■■□□ 2.08
ATP6V1AP38606 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
ATP6V1AP38606 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
ATP6V1AP38606 AC231657.2-201ENST00000624556 255 ntBASIC28.07■■■□□ 2.08
ATP6V1AP38606 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC28.07■■■□□ 2.08
ATP6V1AP38606 KRT87P-202ENST00000534226 1464 ntBASIC28.07■■■□□ 2.08
ATP6V1AP38606 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
ATP6V1AP38606 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ATP6V1AP38606 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ATP6V1AP38606 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
ATP6V1AP38606 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
ATP6V1AP38606 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC28.06■■■□□ 2.08
ATP6V1AP38606 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC28.06■■■□□ 2.08
ATP6V1AP38606 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC28.06■■■□□ 2.08
ATP6V1AP38606 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC28.06■■■□□ 2.08
ATP6V1AP38606 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
ATP6V1AP38606 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
ATP6V1AP38606 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
ATP6V1AP38606 GUSBP6-202ENST00000438529 1198 ntBASIC28.05■■■□□ 2.08
ATP6V1AP38606 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
ATP6V1AP38606 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
ATP6V1AP38606 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
ATP6V1AP38606 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
ATP6V1AP38606 AC007322.1-201ENST00000426983 750 ntBASIC28.04■■■□□ 2.08
ATP6V1AP38606 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC28.04■■■□□ 2.08
ATP6V1AP38606 SLC7A5P2-201ENST00000553010 536 ntBASIC28.04■■■□□ 2.08
ATP6V1AP38606 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC28.04■■■□□ 2.08
ATP6V1AP38606 KRT18P6-201ENST00000555540 1265 ntBASIC28.04■■■□□ 2.08
ATP6V1AP38606 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC28.04■■■□□ 2.08
ATP6V1AP38606 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
ATP6V1AP38606 UBE2DNL-204ENST00000602536 740 ntBASIC28.04■■■□□ 2.08
ATP6V1AP38606 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
ATP6V1AP38606 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
ATP6V1AP38606 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC28.03■■■□□ 2.08
ATP6V1AP38606 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC28.03■■■□□ 2.08
ATP6V1AP38606 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ATP6V1AP38606 PARP1-202ENST00000366792 553 ntTSL 3 BASIC28.03■■■□□ 2.08
ATP6V1AP38606 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
ATP6V1AP38606 METTL15-202ENST00000403099 795 ntTSL 5 BASIC28.03■■■□□ 2.08
ATP6V1AP38606 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ATP6V1AP38606 AC005181.1-201ENST00000604782 1256 ntBASIC28.03■■■□□ 2.08
ATP6V1AP38606 TFG-210ENST00000620299 1289 ntTSL 5 BASIC28.03■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms