Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC43A1O75387 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLC43A1O75387 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
SLC43A1O75387 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC43A1O75387 PKD1P6-201ENST00000343738 4769 ntBASIC19.71■□□□□ 0.75
SLC43A1O75387 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.71■□□□□ 0.75
SLC43A1O75387 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC43A1O75387 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC43A1O75387 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC43A1O75387 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC43A1O75387 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC43A1O75387 AL121603.2-201ENST00000557373 2117 ntBASIC19.71■□□□□ 0.75
SLC43A1O75387 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC43A1O75387 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.71■□□□□ 0.75
SLC43A1O75387 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SLC43A1O75387 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC43A1O75387 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
SLC43A1O75387 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC43A1O75387 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC43A1O75387 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC43A1O75387 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC43A1O75387 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC43A1O75387 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SLC43A1O75387 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SLC43A1O75387 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC43A1O75387 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC43A1O75387 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC43A1O75387 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC43A1O75387 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC43A1O75387 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
SLC43A1O75387 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC43A1O75387 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC43A1O75387 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC43A1O75387 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SLC43A1O75387 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC43A1O75387 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC43A1O75387 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC43A1O75387 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC43A1O75387 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC43A1O75387 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC43A1O75387 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC43A1O75387 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC43A1O75387 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SLC43A1O75387 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC43A1O75387 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.69■□□□□ 0.74
SLC43A1O75387 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC43A1O75387 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC43A1O75387 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC43A1O75387 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC43A1O75387 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.68■□□□□ 0.74
SLC43A1O75387 AC006455.2-201ENST00000429931 906 ntBASIC19.68■□□□□ 0.74
SLC43A1O75387 DUX4L19-201ENST00000557448 1267 ntBASIC19.68■□□□□ 0.74
SLC43A1O75387 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC43A1O75387 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLC43A1O75387 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SLC43A1O75387 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC43A1O75387 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC43A1O75387 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC43A1O75387 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC43A1O75387 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SLC43A1O75387 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC43A1O75387 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC43A1O75387 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC43A1O75387 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC43A1O75387 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.67■□□□□ 0.74
SLC43A1O75387 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC43A1O75387 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.67■□□□□ 0.74
SLC43A1O75387 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC43A1O75387 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC43A1O75387 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
SLC43A1O75387 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC43A1O75387 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC43A1O75387 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SLC43A1O75387 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC43A1O75387 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC43A1O75387 AL499627.2-201ENST00000606283 725 ntBASIC19.66■□□□□ 0.74
SLC43A1O75387 pRNA.6-201ENST00000610482 90 ntBASIC19.66■□□□□ 0.74
SLC43A1O75387 pRNA.5-201ENST00000612139 90 ntBASIC19.66■□□□□ 0.74
SLC43A1O75387 pRNA.11-201ENST00000618423 90 ntBASIC19.66■□□□□ 0.74
SLC43A1O75387 pRNA.13-201ENST00000619112 90 ntBASIC19.66■□□□□ 0.74
SLC43A1O75387 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC43A1O75387 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
SLC43A1O75387 SYT6-210ENST00000641643 1587 ntBASIC19.66■□□□□ 0.74
SLC43A1O75387 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC43A1O75387 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC43A1O75387 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SLC43A1O75387 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC43A1O75387 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC43A1O75387 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC43A1O75387 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC43A1O75387 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.65■□□□□ 0.74
SLC43A1O75387 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC43A1O75387 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC43A1O75387 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC43A1O75387 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SLC43A1O75387 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC43A1O75387 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC43A1O75387 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC43A1O75387 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.64■□□□□ 0.74
SLC43A1O75387 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms