Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.7■□□□□ 0.74
PTP4A3O75365 AL117332.1-201ENST00000622628 974 ntBASIC19.7■□□□□ 0.74
PTP4A3O75365 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTP4A3O75365 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTP4A3O75365 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.7■□□□□ 0.74
PTP4A3O75365 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTP4A3O75365 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PTP4A3O75365 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.7■□□□□ 0.74
PTP4A3O75365 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTP4A3O75365 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTP4A3O75365 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.69■□□□□ 0.74
PTP4A3O75365 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
PTP4A3O75365 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTP4A3O75365 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTP4A3O75365 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.69■□□□□ 0.74
PTP4A3O75365 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.69■□□□□ 0.74
PTP4A3O75365 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A3O75365 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
PTP4A3O75365 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A3O75365 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.68■□□□□ 0.74
PTP4A3O75365 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A3O75365 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A3O75365 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A3O75365 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PTP4A3O75365 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A3O75365 AC010542.4-201ENST00000563151 1910 ntBASIC19.68■□□□□ 0.74
PTP4A3O75365 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A3O75365 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.68■□□□□ 0.74
PTP4A3O75365 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A3O75365 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A3O75365 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.67■□□□□ 0.74
PTP4A3O75365 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTP4A3O75365 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTP4A3O75365 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTP4A3O75365 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTP4A3O75365 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTP4A3O75365 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTP4A3O75365 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.67■□□□□ 0.74
PTP4A3O75365 AC241377.3-202ENST00000626088 1088 ntBASIC19.67■□□□□ 0.74
PTP4A3O75365 AC241585.3-202ENST00000628937 1088 ntBASIC19.67■□□□□ 0.74
PTP4A3O75365 AC245100.8-202ENST00000629247 1058 ntBASIC19.67■□□□□ 0.74
PTP4A3O75365 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTP4A3O75365 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTP4A3O75365 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.67■□□□□ 0.74
PTP4A3O75365 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.67■□□□□ 0.74
PTP4A3O75365 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.67■□□□□ 0.74
PTP4A3O75365 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTP4A3O75365 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.66■□□□□ 0.74
PTP4A3O75365 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTP4A3O75365 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTP4A3O75365 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTP4A3O75365 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.66■□□□□ 0.74
PTP4A3O75365 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PTP4A3O75365 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTP4A3O75365 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTP4A3O75365 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.66■□□□□ 0.74
PTP4A3O75365 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTP4A3O75365 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PTP4A3O75365 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PTP4A3O75365 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTP4A3O75365 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.65■□□□□ 0.74
PTP4A3O75365 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
PTP4A3O75365 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.65■□□□□ 0.74
PTP4A3O75365 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTP4A3O75365 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTP4A3O75365 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTP4A3O75365 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTP4A3O75365 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTP4A3O75365 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
PTP4A3O75365 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.64■□□□□ 0.73
PTP4A3O75365 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTP4A3O75365 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.64■□□□□ 0.73
PTP4A3O75365 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.64■□□□□ 0.73
PTP4A3O75365 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.64■□□□□ 0.73
PTP4A3O75365 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTP4A3O75365 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
PTP4A3O75365 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTP4A3O75365 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PTP4A3O75365 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.64■□□□□ 0.73
PTP4A3O75365 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.64■□□□□ 0.73
PTP4A3O75365 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTP4A3O75365 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.64■□□□□ 0.73
PTP4A3O75365 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTP4A3O75365 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
PTP4A3O75365 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PTP4A3O75365 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTP4A3O75365 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.63■□□□□ 0.73
PTP4A3O75365 AL031602.1-201ENST00000633169 911 ntBASIC19.63■□□□□ 0.73
PTP4A3O75365 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTP4A3O75365 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PTP4A3O75365 AL121603.2-201ENST00000557373 2117 ntBASIC19.63■□□□□ 0.73
PTP4A3O75365 FAM99A-202ENST00000538190 1989 ntBASIC19.63■□□□□ 0.73
PTP4A3O75365 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTP4A3O75365 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.62■□□□□ 0.73
PTP4A3O75365 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PTP4A3O75365 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.62■□□□□ 0.73
PTP4A3O75365 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.62■□□□□ 0.73
PTP4A3O75365 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PTP4A3O75365 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PTP4A3O75365 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms