Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CUBNO60494 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CUBNO60494 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CUBNO60494 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CUBNO60494 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CUBNO60494 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUBNO60494 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUBNO60494 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.65■□□□□ 0.42
CUBNO60494 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUBNO60494 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUBNO60494 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CUBNO60494 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CUBNO60494 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.65■□□□□ 0.42
CUBNO60494 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CUBNO60494 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CUBNO60494 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.65■□□□□ 0.42
CUBNO60494 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CUBNO60494 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC17.65■□□□□ 0.42
CUBNO60494 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CUBNO60494 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.65■□□□□ 0.42
CUBNO60494 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.65■□□□□ 0.42
CUBNO60494 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CUBNO60494 AC004687.1-201ENST00000579003 1625 ntBASIC17.65■□□□□ 0.42
CUBNO60494 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
CUBNO60494 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUBNO60494 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUBNO60494 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.64■□□□□ 0.41
CUBNO60494 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.64■□□□□ 0.41
CUBNO60494 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CUBNO60494 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.64■□□□□ 0.41
CUBNO60494 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.64■□□□□ 0.41
CUBNO60494 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUBNO60494 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CUBNO60494 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CUBNO60494 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.64■□□□□ 0.41
CUBNO60494 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
CUBNO60494 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUBNO60494 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CUBNO60494 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.64■□□□□ 0.41
CUBNO60494 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.64■□□□□ 0.41
CUBNO60494 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CUBNO60494 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CUBNO60494 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CUBNO60494 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.63■□□□□ 0.41
CUBNO60494 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.63■□□□□ 0.41
CUBNO60494 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CUBNO60494 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
CUBNO60494 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CUBNO60494 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.63■□□□□ 0.41
CUBNO60494 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CUBNO60494 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CUBNO60494 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CUBNO60494 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CUBNO60494 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.63■□□□□ 0.41
CUBNO60494 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CUBNO60494 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CUBNO60494 SLC29A4P1-201ENST00000398760 971 ntBASIC17.62■□□□□ 0.41
CUBNO60494 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CUBNO60494 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CUBNO60494 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUBNO60494 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUBNO60494 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CUBNO60494 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.62■□□□□ 0.41
CUBNO60494 SMUG1P1-201ENST00000590640 811 ntBASIC17.62■□□□□ 0.41
CUBNO60494 AC092118.2-201ENST00000613495 667 ntBASIC17.62■□□□□ 0.41
CUBNO60494 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUBNO60494 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CUBNO60494 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC17.62■□□□□ 0.41
CUBNO60494 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.62■□□□□ 0.41
CUBNO60494 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CUBNO60494 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.62■□□□□ 0.41
CUBNO60494 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.62■□□□□ 0.41
CUBNO60494 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CUBNO60494 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CUBNO60494 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CUBNO60494 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.62■□□□□ 0.41
CUBNO60494 KRT18P29-201ENST00000397031 1267 ntBASIC17.61■□□□□ 0.41
CUBNO60494 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUBNO60494 DUSP8P5-201ENST00000422884 1815 ntBASIC17.61■□□□□ 0.41
CUBNO60494 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
CUBNO60494 AC104187.1-201ENST00000607510 612 ntBASIC17.61■□□□□ 0.41
CUBNO60494 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CUBNO60494 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUBNO60494 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUBNO60494 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.61■□□□□ 0.41
CUBNO60494 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.61■□□□□ 0.41
CUBNO60494 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.61■□□□□ 0.41
CUBNO60494 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUBNO60494 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CUBNO60494 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CUBNO60494 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CUBNO60494 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CUBNO60494 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.6■□□□□ 0.41
CUBNO60494 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CUBNO60494 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CUBNO60494 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CUBNO60494 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.6■□□□□ 0.41
CUBNO60494 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CUBNO60494 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.6■□□□□ 0.41
CUBNO60494 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms