Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PRICKLE3O43900 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PRICKLE3O43900 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRICKLE3O43900 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRICKLE3O43900 IRS3P-201ENST00000223076 1006 ntBASIC21.01■□□□□ 0.95
PRICKLE3O43900 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.01■□□□□ 0.95
PRICKLE3O43900 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRICKLE3O43900 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRICKLE3O43900 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.01■□□□□ 0.95
PRICKLE3O43900 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PRICKLE3O43900 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PRICKLE3O43900 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRICKLE3O43900 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRICKLE3O43900 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRICKLE3O43900 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21■□□□□ 0.95
PRICKLE3O43900 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21■□□□□ 0.95
PRICKLE3O43900 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PRICKLE3O43900 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PRICKLE3O43900 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PRICKLE3O43900 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21■□□□□ 0.95
PRICKLE3O43900 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PRICKLE3O43900 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.99■□□□□ 0.95
PRICKLE3O43900 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.99■□□□□ 0.95
PRICKLE3O43900 AC079089.2-201ENST00000531211 1277 ntBASIC20.99■□□□□ 0.95
PRICKLE3O43900 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.99■□□□□ 0.95
PRICKLE3O43900 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.99■□□□□ 0.95
PRICKLE3O43900 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.99■□□□□ 0.95
PRICKLE3O43900 AC137767.1-201ENST00000602918 1920 ntBASIC20.99■□□□□ 0.95
PRICKLE3O43900 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
PRICKLE3O43900 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRICKLE3O43900 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PRICKLE3O43900 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PRICKLE3O43900 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PRICKLE3O43900 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE3O43900 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.98■□□□□ 0.95
PRICKLE3O43900 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE3O43900 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE3O43900 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PRICKLE3O43900 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE3O43900 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE3O43900 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE3O43900 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.98■□□□□ 0.95
PRICKLE3O43900 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE3O43900 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PRICKLE3O43900 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PRICKLE3O43900 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PRICKLE3O43900 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE3O43900 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE3O43900 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PRICKLE3O43900 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE3O43900 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PRICKLE3O43900 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE3O43900 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE3O43900 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.97■□□□□ 0.95
PRICKLE3O43900 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE3O43900 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE3O43900 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.97■□□□□ 0.95
PRICKLE3O43900 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE3O43900 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE3O43900 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE3O43900 AC127496.7-201ENST00000625110 1798 ntBASIC20.97■□□□□ 0.95
PRICKLE3O43900 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PRICKLE3O43900 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PRICKLE3O43900 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.96■□□□□ 0.95
PRICKLE3O43900 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE3O43900 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.96■□□□□ 0.95
PRICKLE3O43900 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
PRICKLE3O43900 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PRICKLE3O43900 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE3O43900 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE3O43900 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PRICKLE3O43900 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE3O43900 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.96■□□□□ 0.95
PRICKLE3O43900 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.96■□□□□ 0.95
PRICKLE3O43900 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE3O43900 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.96■□□□□ 0.95
PRICKLE3O43900 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE3O43900 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.96■□□□□ 0.95
PRICKLE3O43900 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE3O43900 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PRICKLE3O43900 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.95■□□□□ 0.95
PRICKLE3O43900 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PRICKLE3O43900 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.95■□□□□ 0.94
PRICKLE3O43900 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE3O43900 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE3O43900 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE3O43900 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE3O43900 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE3O43900 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE3O43900 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE3O43900 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.95■□□□□ 0.94
PRICKLE3O43900 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE3O43900 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PRICKLE3O43900 SMUG1P1-201ENST00000590640 811 ntBASIC20.95■□□□□ 0.94
PRICKLE3O43900 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.95■□□□□ 0.94
PRICKLE3O43900 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.95■□□□□ 0.94
PRICKLE3O43900 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE3O43900 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PRICKLE3O43900 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PRICKLE3O43900 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms