Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SLC28A2O43868 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC28A2O43868 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SLC28A2O43868 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC28A2O43868 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SLC28A2O43868 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A2O43868 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A2O43868 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A2O43868 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A2O43868 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC28A2O43868 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A2O43868 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A2O43868 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SLC28A2O43868 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SLC28A2O43868 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC28A2O43868 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A2O43868 AC233723.2-201ENST00000623798 2106 ntBASIC20.94■□□□□ 0.94
SLC28A2O43868 AC136469.2-201ENST00000623944 1028 ntBASIC20.94■□□□□ 0.94
SLC28A2O43868 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC28A2O43868 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.94■□□□□ 0.94
SLC28A2O43868 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.94■□□□□ 0.94
SLC28A2O43868 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SLC28A2O43868 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A2O43868 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SLC28A2O43868 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SLC28A2O43868 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A2O43868 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC28A2O43868 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.93■□□□□ 0.94
SLC28A2O43868 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A2O43868 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A2O43868 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
SLC28A2O43868 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.93■□□□□ 0.94
SLC28A2O43868 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.93■□□□□ 0.94
SLC28A2O43868 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
SLC28A2O43868 TMEM191A-211ENST00000637163 1067 ntBASIC20.93■□□□□ 0.94
SLC28A2O43868 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A2O43868 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SLC28A2O43868 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.93■□□□□ 0.94
SLC28A2O43868 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.93■□□□□ 0.94
SLC28A2O43868 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A2O43868 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A2O43868 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A2O43868 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SLC28A2O43868 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC28A2O43868 AC079834.2-201ENST00000609776 1949 ntBASIC20.92■□□□□ 0.94
SLC28A2O43868 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC28A2O43868 BX842568.3-201ENST00000418104 571 ntBASIC20.92■□□□□ 0.94
SLC28A2O43868 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.92■□□□□ 0.94
SLC28A2O43868 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SLC28A2O43868 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC28A2O43868 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SLC28A2O43868 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SLC28A2O43868 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC28A2O43868 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SLC28A2O43868 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC28A2O43868 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC28A2O43868 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SLC28A2O43868 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.91■□□□□ 0.94
SLC28A2O43868 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.91■□□□□ 0.94
SLC28A2O43868 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.91■□□□□ 0.94
SLC28A2O43868 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC28A2O43868 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC28A2O43868 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
SLC28A2O43868 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.91■□□□□ 0.94
SLC28A2O43868 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SLC28A2O43868 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.91■□□□□ 0.94
SLC28A2O43868 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC28A2O43868 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SLC28A2O43868 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC28A2O43868 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC28A2O43868 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
SLC28A2O43868 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.9■□□□□ 0.94
SLC28A2O43868 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.9■□□□□ 0.94
SLC28A2O43868 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SLC28A2O43868 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.9■□□□□ 0.94
SLC28A2O43868 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
SLC28A2O43868 AL117328.2-201ENST00000624617 1940 ntBASIC20.9■□□□□ 0.94
SLC28A2O43868 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SLC28A2O43868 NTF6G-201ENST00000591094 616 ntBASIC20.89■□□□□ 0.93
SLC28A2O43868 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.89■□□□□ 0.93
SLC28A2O43868 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
SLC28A2O43868 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC28A2O43868 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.89■□□□□ 0.93
SLC28A2O43868 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SLC28A2O43868 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC28A2O43868 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SLC28A2O43868 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC28A2O43868 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SLC28A2O43868 AC123595.1-201ENST00000440769 1046 ntBASIC20.88■□□□□ 0.93
SLC28A2O43868 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.88■□□□□ 0.93
SLC28A2O43868 AC126544.1-201ENST00000580842 1059 ntBASIC20.88■□□□□ 0.93
SLC28A2O43868 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC28A2O43868 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.88■□□□□ 0.93
SLC28A2O43868 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SLC28A2O43868 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC28A2O43868 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SLC28A2O43868 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC28A2O43868 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC28A2O43868 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC28A2O43868 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms