Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.69■■□□□ 1.06
PHGDHO43175 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PHGDHO43175 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.69■■□□□ 1.06
PHGDHO43175 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.69■■□□□ 1.06
PHGDHO43175 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PHGDHO43175 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHGDHO43175 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PHGDHO43175 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHGDHO43175 KRT16P3-201ENST00000439127 1283 ntBASIC21.68■■□□□ 1.06
PHGDHO43175 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHGDHO43175 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PHGDHO43175 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHGDHO43175 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHGDHO43175 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PHGDHO43175 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.68■■□□□ 1.06
PHGDHO43175 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PHGDHO43175 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.67■■□□□ 1.06
PHGDHO43175 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.67■■□□□ 1.06
PHGDHO43175 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PHGDHO43175 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PHGDHO43175 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHGDHO43175 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PHGDHO43175 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHGDHO43175 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.67■■□□□ 1.06
PHGDHO43175 AL499627.2-201ENST00000606283 725 ntBASIC21.67■■□□□ 1.06
PHGDHO43175 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.67■■□□□ 1.06
PHGDHO43175 AL035685.1-201ENST00000636663 812 ntBASIC21.67■■□□□ 1.06
PHGDHO43175 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.67■■□□□ 1.06
PHGDHO43175 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHGDHO43175 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PHGDHO43175 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.67■■□□□ 1.06
PHGDHO43175 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.67■■□□□ 1.06
PHGDHO43175 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHGDHO43175 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PHGDHO43175 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PHGDHO43175 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
PHGDHO43175 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.66■■□□□ 1.06
PHGDHO43175 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.66■■□□□ 1.06
PHGDHO43175 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PHGDHO43175 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHGDHO43175 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHGDHO43175 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHGDHO43175 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHGDHO43175 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.66■■□□□ 1.06
PHGDHO43175 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHGDHO43175 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PHGDHO43175 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PHGDHO43175 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.65■■□□□ 1.06
PHGDHO43175 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.65■■□□□ 1.06
PHGDHO43175 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PHGDHO43175 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PHGDHO43175 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.65■■□□□ 1.06
PHGDHO43175 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PHGDHO43175 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PHGDHO43175 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.65■■□□□ 1.06
PHGDHO43175 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PHGDHO43175 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PHGDHO43175 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PHGDHO43175 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PHGDHO43175 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
PHGDHO43175 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.64■■□□□ 1.06
PHGDHO43175 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PHGDHO43175 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PHGDHO43175 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PHGDHO43175 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PHGDHO43175 CA15P2-201ENST00000611168 834 ntBASIC21.64■■□□□ 1.05
PHGDHO43175 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.64■■□□□ 1.05
PHGDHO43175 AL137060.1-201ENST00000618151 2648 ntBASIC21.64■■□□□ 1.05
PHGDHO43175 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.64■■□□□ 1.05
PHGDHO43175 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PHGDHO43175 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PHGDHO43175 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PHGDHO43175 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PHGDHO43175 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PHGDHO43175 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PHGDHO43175 AC006455.2-201ENST00000429931 906 ntBASIC21.63■■□□□ 1.05
PHGDHO43175 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.63■■□□□ 1.05
PHGDHO43175 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.63■■□□□ 1.05
PHGDHO43175 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.63■■□□□ 1.05
PHGDHO43175 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PHGDHO43175 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
PHGDHO43175 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PHGDHO43175 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PHGDHO43175 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.62■■□□□ 1.05
PHGDHO43175 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PHGDHO43175 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHGDHO43175 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.62■■□□□ 1.05
PHGDHO43175 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.62■■□□□ 1.05
PHGDHO43175 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHGDHO43175 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHGDHO43175 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHGDHO43175 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHGDHO43175 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHGDHO43175 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PHGDHO43175 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PHGDHO43175 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.62■■□□□ 1.05
PHGDHO43175 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PHGDHO43175 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PHGDHO43175 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.61■■□□□ 1.05
PHGDHO43175 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms